November 2009 in CRAN

Part of Q4 2009 and 2009.

Final

New packages

230

Updated

Archived

+25

Net growth

New packages (33)

equate Observed-Score Linking and Equating	2009-11-01
phylobase Base Package for Phylogenetic Structures and Comparative Data	2009-11-01
distrEllipse S4 Classes for Elliptically Contoured Distributions	2009-11-03
optparse Command Line Option Parser	2009-11-03
psychotree Recursive Partitioning Based on Psychometric Models	2009-11-04
adephylo Exploratory Analyses for the Phylogenetic Comparative Method	2009-11-05
dclone Data Cloning and MCMC Tools for Maximum Likelihood Methods	2009-11-05
Bolstad2 Bolstad Functions	2009-11-06
cusp Cusp-Catastrophe Model Fitting Using Maximum Likelihood	2009-11-06
topicmodels Topic Models	2009-11-06
MNM Multivariate Nonparametric Methods. An Approach Based on Spatial Signs and Ranks	2009-11-09
stringr Simple, Consistent Wrappers for Common String Operations	2009-11-09
r4ss R Code for Stock Synthesis	2009-11-10
ebdbNet Empirical Bayes Estimation of Dynamic Bayesian Networks	2009-11-11
vegdata Access Vegetation Databases and Treat Taxonomy	2009-11-11
histogram Construction of Regular and Irregular Histograms with Different Options for Automatic Choice of Bins	2009-11-12
HistData Data Sets from the History of Statistics and Data Visualization	2009-11-13
Sleuth2 Data Sets from Ramsey and Schafer's "Statistical Sleuth (2nd Ed)"	2009-11-13
BoolNet Construction, Simulation and Analysis of Boolean Networks	2009-11-16
ibr Iterative Bias Reduction	2009-11-16
plsdof Degrees of Freedom and Statistical Inference for Partial Least Squares Regression	2009-11-16
polySegratio Simulate and Test Marker Dosage for Dominant Markers in Autopolyploids	2009-11-17
polySegratioMM Bayesian Mixture Models for Marker Dosage in Autopolyploids	2009-11-17
testthat Unit Testing for R	2009-11-17
VPdtw Variable Penalty Dynamic Time Warping	2009-11-18
miniGUI Tcl/Tk Quick and Simple Function GUI	2009-11-18
gamlss.add Extra Additive Terms for Generalized Additive Models for Location Scale and Shape	2009-11-22
highlight Syntax Highlighter	2009-11-22
ncvreg Regularization Paths for SCAD and MCP Penalized Regression Models	2009-11-22
NMF Algorithms and Framework for Nonnegative Matrix Factorization (NMF)	2009-11-23
PBSadmb ADMB for R Using Scripts or GUI	2009-11-25
formula.tools Programmatic Utilities for Manipulating Formulas, Expressions, Calls, Assignments and Other R Objects	2009-11-29
crmn CCMN and Other Normalization Methods for Metabolomics Data	2009-11-30

Archived / removed

Why

8 reason not recorded

RScaLAPACK	2009-11-30
twopartqtl	2009-11-25
waveclock	2009-11-20
marelacTeaching	2009-11-19
CircSpatial	2009-11-05
MCMCtGARCH	2009-11-02
MCMCtGARCHM	2009-11-02
MCMCtNARCH	2009-11-02

Notable

Major version jumps

YieldCurve 1.0→2.0 mlegp 2.2.6→3.1.0 spls 1.1-0→2.1-0 dclone 0.9-0→1.0-0 diffusionMap 0.0-2→1.0-0 aspace 1.2→2.2

First-time CRAN authors

Anthony Albano Gyu Jin Choi Peter Humburg Jim Nikelski David Dreifuss Basil Komboz ×2 Julia Kopf ×2 Lennart Schneider ×10 Anders Ellern Bilgrau ×3 David M Blei Shawn Cokus ×2 Raoul P. P. P. Grasman John D Lafferty Xuan-Hieu Phan Jyrki Mottonen Z. Teresa A'mar Sean C. Anderson ×8 Andrew B. Cooper ×2 LaTreese S. Denson Kathryn L. Doering