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phylobase

Base Package for Phylogenetic Structures and Comparative Data

v0.8.12 · Jan 29, 2024 · GPL (>= 2)

Description

Provides a base S4 class for comparative methods, incorporating one or more trees and trait data.

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CRAN Check Status

2 NOTE
12 OK
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r-devel-linux-x86_64-debian-clang NOTE
r-devel-linux-x86_64-debian-gcc NOTE
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK
Check details (2 non-OK)
NOTE r-devel-linux-x86_64-debian-clang

CRAN incoming feasibility

Maintainer: ‘Francois Michonneau <francois.michonneau@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("R", "Hackathon", "et"),
                      family = "al.",
                      role = "aut",
                      comment = "alphabetically: Ben Bolker, Marguerite Butler,\n    Peter Cowan, Damien de Vienne, Dirk Eddelbuettel, Mark Holder, Thibaut\n    Jombart, Steve Kembel, Francois Michonneau, David Orme, Brian O'Meara,\n    Emmanuel Paradis, Jim Regetz, Derrick Zwickl"),
               person(given = "Francois",
                      family = "Michonneau",
                      role = "cre",
                      email = "francois.michonneau@gmail.com"))
as necessary.
NOTE r-devel-linux-x86_64-debian-gcc

CRAN incoming feasibility

Maintainer: ‘Francois Michonneau <francois.michonneau@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("R", "Hackathon", "et"),
                      family = "al.",
                      role = "aut",
                      comment = "alphabetically: Ben Bolker, Marguerite Butler,\n    Peter Cowan, Damien de Vienne, Dirk Eddelbuettel, Mark Holder, Thibaut\n    Jombart, Steve Kembel, Francois Michonneau, David Orme, Brian O'Meara,\n    Emmanuel Paradis, Jim Regetz, Derrick Zwickl"),
               person(given = "Francois",
                      family = "Michonneau",
                      role = "cre",
                      email = "francois.michonneau@gmail.com"))
as necessary.

Check History

NOTE 12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
NOTE r-devel-linux-x86_64-debian-clang

CRAN incoming feasibility

Maintainer: ‘Francois Michonneau <francois.michonneau@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("R", "Hackathon", "et"),
                      family = "al.",
                      role 
...[truncated]...
  Emmanuel Paradis, Jim Regetz, Derrick Zwickl"),
               person(given = "Francois",
                      family = "Michonneau",
                      role = "cre",
                      email = "francois.michonneau@gmail.com"))
as necessary.
NOTE r-devel-linux-x86_64-debian-gcc

CRAN incoming feasibility

Maintainer: ‘Francois Michonneau <francois.michonneau@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("R", "Hackathon", "et"),
                      family = "al.",
                      role 
...[truncated]...
  Emmanuel Paradis, Jim Regetz, Derrick Zwickl"),
               person(given = "Francois",
                      family = "Michonneau",
                      role = "cre",
                      email = "francois.michonneau@gmail.com"))
as necessary.

Reverse Dependencies (15)

Dependency Network

Dependencies Reverse dependencies ade4 ape Rcpp rncl RNeXML DAISIEprep PCPS adephylo adiv ddtlcm nodeSub phyext2 phyloTop phylocanvas phylosem phylosignal RAINBOWR ecostats phyloraster rotl phylobase

Version History

new 0.8.12 Mar 10, 2026
updated 0.8.12 ← 0.8.10 diff Jan 29, 2024
updated 0.8.10 ← 0.8.8 diff Feb 29, 2020
updated 0.8.8 ← 0.8.6 diff Feb 10, 2020
updated 0.8.6 ← 0.8.4 diff Feb 1, 2019
updated 0.8.4 ← 0.8.2 diff Apr 21, 2017
updated 0.8.2 ← 0.8.0 diff Jan 22, 2016
updated 0.8.0 ← 0.6.8 diff Jul 23, 2015
updated 0.6.8 ← 0.6.5.2 diff Mar 19, 2014
updated 0.6.5.2 ← 0.6.5 diff Nov 26, 2013
updated 0.6.5 ← 0.6.4 diff Nov 24, 2012
updated 0.6.4 ← 0.6.3 diff Nov 19, 2012
updated 0.6.3 ← 0.6.2 diff Mar 31, 2011
updated 0.6.2 ← 0.6.1 diff Dec 6, 2010
updated 0.6.1 ← 0.6.0 diff Jul 25, 2010
updated 0.6.0 ← 0.5 diff Jul 23, 2010
new 0.5 Oct 31, 2009