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NMF

Algorithms and Framework for Nonnegative Matrix Factorization (NMF)

v0.28 · Aug 22, 2024 · GPL (>= 2)

Description

Provides a framework to perform Non-negative Matrix Factorization (NMF). The package implements a set of already published algorithms and seeding methods, and provides a framework to test, develop and plug new/custom algorithms. Most of the built-in algorithms have been optimized in C++, and the main interface function provides an easy way of performing parallel computations on multicore machines.

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CRAN Check Status

2 NOTE
12 OK
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Flavor Status
r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 NOTE
r-oldrel-macos-x86_64 NOTE
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK
Check details (2 non-OK)
NOTE r-oldrel-macos-arm64

package dependencies

Package suggested but not available for checking: ‘doMPI’
NOTE r-oldrel-macos-x86_64

package dependencies

Package suggested but not available for checking: ‘doMPI’

Check History

NOTE 12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
NOTE r-oldrel-macos-arm64

package dependencies

Package suggested but not available for checking: ‘doMPI’
NOTE r-oldrel-macos-x86_64

package dependencies

Package suggested but not available for checking: ‘doMPI’

Reverse Dependencies (20)

Dependency Network

Dependencies Reverse dependencies registry rngtools cluster stringr digest gridBase colorspace RColorBrewer foreach doParallel ggplot2 reshape2 Biobase codetools BiocManager CNSigs IntNMF InterSIM fabisearch DBNMFrank MetabolSSMF SCdeconR SpNMF hNMF scITD shattering sigminer CimpleG Evacluster crassmat +5 more reverse deps NMF

Version History

new 0.28 Mar 10, 2026
updated 0.28 ← 0.27 diff Aug 21, 2024
updated 0.27 ← 0.26 diff Feb 7, 2024
updated 0.26 ← 0.25 diff Mar 19, 2023
updated 0.25 ← 0.24.0 diff Nov 17, 2022
updated 0.24.0 ← 0.23.0 diff Mar 29, 2022
updated 0.23.0 ← 0.22.0 diff Jul 31, 2020
updated 0.22.0 ← 0.21.0 diff Feb 11, 2020
updated 0.21.0 ← 0.20.6 diff Mar 5, 2018
updated 0.20.6 ← 0.20.5 diff May 25, 2015
updated 0.20.5 ← 0.20.2 diff Mar 17, 2014
updated 0.20.2 ← 0.20 diff Mar 8, 2014
updated 0.20 ← 0.17 diff Oct 31, 2013
updated 0.17 ← 0.16.6 diff May 14, 2013
updated 0.16.6 ← 0.16.2 diff May 12, 2013
updated 0.16.1 ← 0.5.06 diff Mar 26, 2013
updated 0.16.2 ← 0.16.1 diff Mar 26, 2013
updated 0.5.06 ← 0.5.05 diff Dec 8, 2011
updated 0.5.05 ← 0.5.02 diff Nov 3, 2011
updated 0.5.02 ← 0.5 diff Aug 24, 2010