R Observatory: Metrics for ebdbNet version 1.2.8

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

ebdbNet

1.2.8

Empirical Bayes Estimation of Dynamic Bayesian Networks

0packages depend

3.2Kdownloads / year

–test coverage

11/13checks pass

Overview

About

Maintained by Andrea RauFirst published 2009-11-1110 releasesCRAN page ↗GitHub ↗

Infer the adjacency matrix of a network from time course data using an empirical Bayes estimation procedure based on Dynamic Bayesian Networks.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("ebdbNet", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("andreamrau/ebdbNet")

Development version from andreamrau/ebdbNet. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-ebdbnet

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-ebdbNet

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-ebdbNet

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

2NOTE11OK

Failing flavors

NOTE r-devel-linux-x86_64-debian-clang
NOTE r-devel-linux-x86_64-debian-gcc

Slowest check: 2.1 min · r-devel-windows-x86_64

Code health

None

Tests · ratio 0.00

not tracked

Coverage

100%

Documentation · exports

4

Dependencies · direct

Check history

NOTE2026-03-10
12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 162 wordsVignettesNopkgdown siteNoNEWSYes · 33% structuredCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 100%
Return-value docs: 86%
References docs: 44%

Downloads

3.2K

CRAN downloads in the past year

Rank #10,041 · ~9/day · ~263/mo

Releases R versions

Daily download trend is not available in this view yet.

25930 days

97590 days

3.2K1 year

Compare downloads with other packages →

Also on407 r2u11 autocran83 c2d4u

Repository

GitHub ↗ andreamrau/ebdbnet

4Stars

2Forks

0Open issues

0Open PRs

0Releases

11Commits

1Contributors

11 commits · Last activity 2023-09-04

Stars over time

2024-01-19 · 42026-07-07 · 4

Repository practices

Upstream repositoryBeta

Checks run against github.com/andreamrau/ebdbnet on 2026-08-09.

No development-tooling practices detected in the upstream repository.

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

2 external dependencies (excludes base and recommended)

Depends (2)

R >= 4.1.0igraph

Imports (3)

graphicsstatsmethods

LinkingTo (0)

none

Suggests (1)

GeneNet

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

People & History

People (0)

Author records are not tracked yet for this package.

Listed in earlier versions (1)

Andrea Rau

no longer listed · 1.0 to 1.2.8

Package Timeline

10 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
1.2.8Latest
2023-09-04 · current release · diff ↗
R
R 4.3.0 released · 2023-04-21
1.2.7
2023-03-28 · diff ↗
R
R 4.2.0 released · 2022-04-22
1.2.6
2021-10-15 · diff ↗
R
R 4.1.0 released · 2021-05-18
R
R 4.0.0 released · 2020-04-24
R
R 3.6.0 released · 2019-04-26
R
R 3.5.0 released · 2018-04-23
R
R 3.4.0 released · 2017-04-21
1.2.5
2016-11-21 · diff ↗
R
R 3.3.0 released · 2016-05-03
R
R 3.2.0 released · 2015-04-16

Show 14 earlier events

R
R 3.1.0 released · 2014-04-10
1.2.3
2013-07-26 · diff ↗
R
R 3.0.0 released · 2013-04-03
1.2.2
2012-05-31 · diff ↗
R
R 2.15.0 released · 2012-03-30
1.2.1
2012-02-28 · diff ↗
R
R 2.14.0 released · 2011-10-31
1.2
2011-09-07 · diff ↗
R
R 2.13.0 released · 2011-04-13
R
R 2.12.0 released · 2010-10-15
R
R 2.11.0 released · 2010-04-22
1.1
2010-01-21 · diff ↗
1.0
2009-11-11
R
R 2.10.0 released · 2009-10-26

Package metadata

First published: 2009-11-11
Total releases: 10 / 17 yrs
License: GPL (>= 3) OSI
Minimum R: ≥ 4.1.0
Download size: 29 KB
Installed size: not tracked yet
With dependencies: not tracked yet

Appears in task views

Bayesian Inference

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("ebdbNet")

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for ebdbNet version 1.2.8 [Data set]. HJJB, LLC. Data release v2026-08-15. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-15, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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