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BiocAzul

Bioc current

Programmatic Access to the Azul API

v1.0.3 · software · Artistic-2.0

Release Lineage

Entered 3.23 · Apr 29, 2026

Current · Requires R 4.6

1.0 In 1 of 49 releases 3.23

Description

Represents the OpenAPI v2 Azul API as an R object for performing requests. The infrastructure uses the AnVIL and rapiclient packages. Users can connect to either the AnVIL or Human Cell Atlas Data Explorers.

Test coverage

Line coverage

Expression

Tests / Examples

Functions

20 7 exported

Complexity

2.3 avg / 7 max

Call network

20 nodes / 13 edges

Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.

Loading call graph…

Lowest coverage

Per-function coverage is not measured for this package yet.

Code

Structure

Lines of code

1,177

Files

28

Compiled share

0%

Has compiled src

No

Language breakdown

R 676 (57.4%)Tests 2 (0.2%)Docs 301 (25.6%)Vignettes 198 (16.8%)

API

Exported functions

7

Internal functions

12

Recent export changes

v3.23+7 Azul, availableFacets, facetTable +4 more

Testing & CI

Has tests

Yes

Test-to-code ratio

0.00

testthat edition

CI present

No

CI type

[]

PR gated

No

Docs

Roxygen coverage

100%

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

0%

Unsafe pattern score

0

Dep constraint coverage

11.1%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

4.6.0

System requirements

C++ standard

License

Artistic-2.0

License flags

SPDX valid, OSI approved

History

Versions

1

First release

2026-05-06

Latest release

2026-05-06

Avg cadence

Cold removal rate

Dep drift

0

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.

Documentation

Documentation
READMEYes · 470 wordsVignettesYes · dynamicpkgdown siteNoNEWSYes · 67% structuredCode of conductNoContributing guideNo
Examples that run
100%
Documented parameters
100%
Return-value docs
100%
References docs
0%

Topics

People

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("BiocAzul")
Ramos, M., & NHGRI AnVIL Project. (2026). BiocAzul: Programmatic Access to the Azul API (Version 1.0.3) [Computer software]. https://bioconductor.org/packages/BiocAzul

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

APA

Balamuta, J. J. (2026). R Observatory: Metrics for BiocAzul version 1.0.3 [Data set]. HJJB, LLC. Data release v2026-08-26. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-26, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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