terraTCGAdata
Bioc currentOpenAccess TCGA Data on Terra as MultiAssayExperiment
Release Lineage
Entered 3.15 · Apr 27, 2022
Current · Requires R 4.6
Description
Leverage the existing open access TCGA data on Terra with well-established Bioconductor infrastructure. Make use of the Terra data model without learning its complexities. With a few functions, you can copy / download and generate a MultiAssayExperiment from the TCGA example workspaces provided by Terra.
Test coverage
Line coverage
–
Expression
–
Tests / Examples
–
Functions
19 9 exported
Complexity
3.3 avg / 11 max
Call network
19 nodes / 23 edges
Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.
Call graph
Open call graph →Lowest coverage
Per-function coverage is not measured for this package yet.
Code
Structure
Lines of code
1,439
Files
24
Compiled share
0%
Has compiled src
No
Language breakdown
API
Exported functions
9
Internal functions
8
Testing & CI
Has tests
Yes
Test-to-code ratio
0.07
testthat edition
3
CI present
No
CI type
[]
PR gated
No
Docs
Roxygen coverage
100%
Health & Security signals
Informational signals; not verdicts.
on.exit coverage
0%
Unsafe pattern score
0
Dep constraint coverage
0%
Secret pattern count
0
Bundled 3rd-party code
2 items
Portability & License
Min R version
–
System requirements
–
C++ standard
–
License
Artistic-2.0
License flags
SPDX valid, OSI approved
History
Versions
9
First release
2022-04-27
Latest release
2026-04-28
Avg cadence
182 days
Cold removal rate
100%
Dep drift
1
LOC over versions
Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.
Documentation
- Examples that run
- 100%
- Documented parameters
- 96%
- Return-value docs
- 100%
- References docs
- 0%
Topics
People
- Marcel Ramos author maintainer