Search the Observatory
CRAN packages, Bioconductor packages, and the datasets they ship.
CRAN packages
607 matches-
Extension of `data.frame`
Fast aggregation of large data (e.g. 100GB in RAM), fast ordered joins, fast add/modify/delete of columns by group using no copies at all, list columns, friendly and...
Tyson Barrett 800.5K downloads/30d -
Analyze Multi-Threading Performance for 'data.table' Functions
Assists in finding the most suitable thread count for the various 'data.table' routines that support parallel processing.
Anirban Chetia 367 downloads/30d -
Combines 'data.table' and 'matrix' Classes
Provides two classes extending 'data.table' class. Simple 'tableList' class wraps 'data.table' and any additional structures together. More complex 'tableMatrix' class combines 'data.table' and 'matrix'. See <http://github...
Petr Lenhard 131 downloads/30d -
Database Queries Using 'data.table' Syntax
Query database tables over a 'DBI' connection using 'data.table' syntax. Attach database schemas to the search path. Automatically merge using foreign key constraints.
Kjell P. Konis 192 downloads/30d -
Export Data Frames to Excel Workbook
Collection of functions that allow to export data frames to excel workbook.
Damien Dotta 184 downloads/30d -
Build 'data.table' Expressions with Data Manipulation Verbs
A specialization of 'dplyr' data manipulation verbs that parse and build expressions which are ultimately evaluated by 'data.table', letting it handle all optimizations. A set of additional verbs is...
Alexis Sarda-Espinosa 235 downloads/30d -
Compare Data Frames
A toolbox for comparing two data frames. This package is defunct. I recommend you use the "versus" package instead.
Ryan Dickerson 176 downloads/30d -
Manipulation of Matched Phylogenies and Data using 'data.table'
An implementation that combines trait data and a phylogenetic tree (or trees) into a single object of class 'treedata.table'. The resulting object can be easily manipulated to simultaneously change...
Cristian Roman-Palacios 173 downloads/30d -
Quickly Explore Your Data Using 'ggplot2' and 'table1' Summary Tables
Quickly and easily perform exploratory data analysis by uploading your data as a 'csv' file. Start generating insights using 'ggplot2' plots and 'table1' tables with descriptive stats, all using an...
Samer Mouksassi 430 downloads/30d -
'data.table' Time-Series
High-frequency time-series support via 'nanotime' and 'data.table'.
Dirk Eddelbuettel 424 downloads/30d -
Make and Apply Customized Rounding Specifications for Tables
Translate double and integer valued data into character values formatted for tabulation in manuscripts or other types of academic reports.
Byron Jaeger 222 downloads/30d -
Tidy Interface to 'data.table'
A tidy interface to 'data.table', giving users the speed of 'data.table' while using tidyverse-like syntax.
Mark Fairbanks 2.7K downloads/30d -
Convert 'sjPlot' HTML-Tables to R 'data.frame'
A small set of helper functions to convert 'sjPlot' HTML-tables to R data.frame objects / knitr::kable-tables.
Lorenz A. Kapsner 225 downloads/30d -
Automatically Convert Hierarchical for-Human Tables to Machine-Readable LongForm Dataframes
...recognise positional cues present in hierarchical for-human Tables (which would normally be interpreted visually by the human brain) to decompose, then reconstruct the data into machine-readable LongForm Dataframes.
Jimmy Oh 137 downloads/30d -
Table 1 Heatmap
...The amount of splits in the data in such a table is limited. Table1Heatmap draws a heatmap of all crosstables that can be generated with the data. Users can choose...
Philip C Schouten 136 downloads/30d -
Create 'Table 1' to Describe Baseline Characteristics with or without Propensity Score Weights
Creates 'Table 1', i.e., description of baseline patient characteristics, which is essential in every medical research. Supports both continuous and categorical variables, as well as p-values and standardized...
Kazuki Yoshida 20.9K downloads/30d -
Tabulate Descriptive Statistics in Multiple Formats
Creates a table of descriptive statistics for factor and numeric columns in a data frame. Displays these by groups, if any. Highly customizable, with support for 'html' and 'pdf' provided...
Tim Bergsma 420 downloads/30d -
Reshape Data Table
A grammar of data manipulation with 'data.table', providing a consistent a series of utility functions that help you solve the most common data manipulation challenges.
Jiena McLellan 192 downloads/30d -
Export Tables to LaTeX or HTML
Coerce data to LaTeX and HTML tables.
David Scott 558.5K downloads/30d -
'rquery' for 'data.table'
Implements the 'rquery' piped Codd-style query algebra using 'data.table'. This allows for a high-speed in memory implementation of Codd-style data manipulation tools.
John Mount 1.6K downloads/30d
Bioconductor packages
57 matches-
Complexome Profiling Analysis package
This package is for analysis of SILAC labeled complexome profiling data. It uses peptide table in tab-delimited format as an input and produces ready-to-use tables and plots.
Petra Palenikova -
Representation of SQL tables in DataFrame metaphor
Implements bindings for SQL tables that are compatible with Bioconductor S4 data structures, namely the DataFrame and DelayedArray. This allows SQL-derived data to be easily used inside other Bioconductor...
Qian Liu -
SQLites, tibbles, and data.tables for AnnotationHub
Supplies AnnotationHub with some preprocessed sqlite, tibble, and data.table datasets of PubMed. All the datasets are generated by our Snakemake workflow [pubmed-workflow](https://github.com/rikenbit/pubmed-workflow...
Koki Tsuyuzaki -
Supplementary data package for Dona et al. (2013) containing example images and tables
...Package contains runnable vignettes showing an example image segmentation for one posterior lateral line primordium, and also the data table and code used to analyze tissue-scale lifetime-ratio statistics.
Joseph D. Barry -
Mass Spectrometry-Based Single-Cell Proteomics Data Analysis
...The package offers the user the functionality to process quantitative table (as generated by MaxQuant, Proteome Discoverer, and more) into data tables ready for downstream analysis and data visualization.
Christophe Vanderaa -
Outlier Analysis for pairwise differential comparison
...as phosphoproteomics or transcriptomics, but it can be used for any data that can be represented by a 2D table, and has two sub populations within the table to compare.
RugglesLab -
Functional annotation-driven unsupervised clustering for single-cell data
...Inputting a single-cell RNA-seq data and knowledge-based databases, such as Cell Ontology, Gene Ontology, KEGG, etc., ASURAT transforms gene expression tables into original multivariate tables, termed sign...
Keita Iida -
Tools for making reports in various formats
...Users can generate tables with sortable and filterable columns, make and display plots, and link table entries to other data sources such as NCBI or larger plots within the HTML...
Jason A. Hackney
Archived packages
12 matches-
Collect Data from the Census API
Greg Macfarlane CRAN's reason: email to the maintainer is undeliverable -
Harmonise and Integrate Heterogeneous Areal Data
Steffen Ehrmann CRAN's reason: requires archived package 'fuzzyjoin' -
Mexican Regional Gross Domestic Product
Marco Antonio Pérez-Méndez CRAN's reason: policy violation. On Internet access -
Directly Extracts Complete CANSIM Data Tables
Marco Lugo CRAN's reason: issues were not corrected in time -
Download, Analyze & Clean New Jersey Car Crash Data
Gavin Rozzi CRAN's reason: policy violation, again. On Internet access -
Prepare Housing Data for Analysis
Ilythia Morley CRAN's reason: email to the maintainer is undeliverable -
Searchable Variable Explorer with Labelled Variables
Vlad Tarko CRAN's reason: policy violation. On Internet access -
Refining Data Table Using a Set of Formulas
Kim Seonghyun CRAN's reason: email to the maintainer is undeliverable