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ASURAT

Bioc current

Functional annotation-driven unsupervised clustering for single-cell data

v1.16.0 · software · GPL-3 + file LICENSE
View on Bioconductor ↗ Source ↗

Release Lineage

Entered 3.15 · Apr 27, 2022

Current · Requires R 4.6

1.0 In 9 of 49 releases 3.23

Description

ASURAT is a software for single-cell data analysis. Using ASURAT, one can simultaneously perform unsupervised clustering and biological interpretation in terms of cell type, disease, biological process, and signaling pathway activity. Inputting a single-cell RNA-seq data and knowledge-based databases, such as Cell Ontology, Gene Ontology, KEGG, etc., ASURAT transforms gene expression tables into original multivariate tables, termed sign-by-sample matrices (SSMs).

Topics

GeneExpression SingleCell Sequencing Clustering GeneSignaling

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