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Topic: DimensionReduction or CancerData or Genetics

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18 packages on Bioconductor tagged DimensionReduction or CancerData or Genetics, most distinct IPs first

DimensionReduction, CancerData and Genetics in Topics

PackageMaintainerCategoryLatest versionDistinct IPs a monthNeeds
DECIPHER
Tools for curating, analyzing, and manipulating biological sequencesErik Wright		Erik Wrightsoftware30 Jul 20264,88216
DMRcate
Methylation array and sequencing spatial analysis methodsTim Peters		Tim Peterssoftware3 May 20261,838224
deepSNV
Detection of subclonal SNVs in deep sequencing data.Moritz Gerstung		Moritz Gerstungsoftware28 Apr 20261,28679
DRIMSeq
Differential transcript usage and tuQTL analyses with Dirichlet-multinomial model in RNA-seqMalgorzata Nowicka		Malgorzata Nowickasoftware28 Apr 20261,19852
densvis
Density-Preserving Data Visualization via Non-Linear Dimensionality ReductionAlan O'Callaghan		Alan O'Callaghansoftware28 Apr 20261,15026
depmap
Cancer Dependency Map Data PackageLaurent Gatto		Laurent Gattoexperiment5 May 20261,00064
distinct
distinct: a method for differential analyses via hierarchical permutation testsSimone Tiberi		Simone Tiberisoftware24 Sep 202684388
DNAfusion
Identification of gene fusions using paired-end sequencingChristoffer Trier Maansson		Christoffer Trier Maanssonsoftware28 Apr 202679677
dearseq
Differential Expression Analysis for RNA-seq data through a robust variance component testBoris P. Hejblum		Boris P. Hejblumsoftware28 Apr 202677155
decompTumor2Sig
Decomposition of individual tumors into mutational signatures by signature refittingRosario M. Piro		Rosario M. Pirosoftware23 Jul 2026757105
discordant
The Discordant Method: A Novel Approach for Differential CorrelationMcGrath Max		McGrath Maxsoftware28 Apr 202673629
DepecheR
Determination of essential phenotypic elements of clusters in high-dimensional entitiesJakob Theorell		Jakob Theorellsoftware28 Apr 2026734104
diffuStats
Diffusion scores on biological networksSergio Picart-Armada		Sergio Picart-Armadasoftware28 Apr 202672939
DifferentialRegulation
Differentially regulated genes from scRNA-seq dataSimone Tiberi		Simone Tiberisoftware28 Apr 202667768
DelayedTensor
R package for sparse and out-of-core arithmetic and decomposition of TensorKoki Tsuyuzaki		Koki Tsuyuzakisoftware28 Apr 202667453
DLBCL
Diffuse large B-cell lymphoma expression dataMarcus Dittrich		Marcus Dittrichexperiment5 May 20265689
DOTSeq
Genome-wide Detection of Differential ORF UsageChun Shen Lim		Chun Shen Limsoftware28 Apr 2026418157
DeSousa2013
Poor prognosis colon cancer is defined by a molecularly distinct subtype and precursor lesionXin Wang		Xin Wangexperiment5 May 2026304123