DNAfusion
Bioc currentIdentification of gene fusions using paired-end sequencing
v1.14.0
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software
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GPL-3
Release Lineage
Entered 3.16 · Nov 2, 2022
Current · Requires R 4.6
1.0
In 8 of 49 releases
3.23
Description
DNAfusion can identify gene fusions such as EML4-ALK based on paired-end sequencing results. This package was developed using position deduplicated BAM files generated with the AVENIO Oncology Analysis Software. These files are made using the AVENIO ctDNA surveillance kit and Illumina Nextseq 500 sequencing. This is a targeted hybridization NGS approach and includes ALK-specific but not EML4-specific probes.
Code
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Topics
People
- Christoffer Trier Maansson author maintainer
- Emma Roger Andersen contributor rev
- Peter Meldgaard dtc
- Boe Sandahl Sorensen rev fnd
- Maiken Parm Ulhoi dtc