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zenith

Bioc current

Gene set analysis following differential expression using linear (mixed) modeling with dream

v1.14.0 · software · Artistic-2.0

Release Lineage

Entered 3.16 · Nov 2, 2022

Current · Requires R 4.6

1.0 In 8 of 49 releases 3.23

Description

Zenith performs gene set analysis on the result of differential expression using linear (mixed) modeling with dream by considering the correlation between gene expression traits. This package implements the camera method from the limma package proposed by Wu and Smyth (2012). Zenith is a simple extension of camera to be compatible with linear mixed models implemented in variancePartition::dream().

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Depended on by (2)

Bioconductor (2)

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