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tweeDEseqCountData

Bioc current

RNA-seq count data employed in the vignette of the tweeDEseq package

v1.50.0 · experiment · MIT + file LICENSE

Release Lineage

Entered 2.13 · Oct 15, 2013

Current · Requires R 4.6

1.0 In 26 of 49 releases 3.23

Description

RNA-seq count data from Pickrell et al. (2010) employed to illustrate the use of the Poisson-Tweedie family of distributions with the tweeDEseq package.

Test coverage

Line coverage

Expression

Tests / Examples

Functions

1 0 exported

Complexity

1 avg / 1 max

Call network

1 nodes / 0 edges

Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.

Loading call graph…

Lowest coverage

Per-function coverage is not measured for this package yet.

Code

Structure

Lines of code

696

Files

26

Compiled share

0%

Has compiled src

No

Language breakdown

R 4 (0.6%)Docs 663 (95.3%)Vignettes 29 (4.2%)

API

Exported functions

0

Internal functions

1

Testing & CI

Has tests

No

Test-to-code ratio

0.00

testthat edition

CI present

No

CI type

[]

PR gated

No

Docs

Roxygen coverage

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

Unsafe pattern score

0

Dep constraint coverage

0%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

4.3.0

System requirements

C++ standard

License

MIT + file LICENSE

License flags

SPDX valid, OSI approved

History

Versions

26

First release

2013-12-13

Latest release

2026-04-28

Avg cadence

182 days

Cold removal rate

Dep drift

0

LOC over versions

v2.13: 643 LOCv2.14: 643 LOCv3.0: 643 LOCv3.1: 643 LOCv3.2: 643 LOCv3.3: 643 LOCv3.4: 643 LOCv3.5: 643 LOCv3.6: 643 LOCv3.7: 643 LOCv3.8: 643 LOCv3.9: 643 LOCv3.10: 643 LOCv3.11: 643 LOCv3.12: 643 LOCv3.13: 643 LOCv3.14: 643 LOCv3.15: 643 LOCv3.16: 643 LOCv3.17: 643 LOCv3.18: 696 LOCv3.19: 696 LOCv3.20: 696 LOCv3.21: 696 LOCv3.22: 696 LOCv3.23: 696 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.

Topics

Depended on by (4)

Bioconductor (4)

People

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("tweeDEseqCountData")
Pelegri-Siso, D., Castelo, R., Esnaola, M., & Gonzalez, J. R. (2026). tweeDEseqCountData: RNA-seq count data employed in the vignette of the tweeDEseq package (Version 1.50.0) [Computer software]. https://bioconductor.org/packages/tweeDEseqCountData

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

APA

Balamuta, J. J. (2026). R Observatory: Metrics for tweeDEseqCountData version 1.50.0 [Data set]. HJJB, LLC. Data release v2026-08-22. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-22, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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