gDRimport
Bioc currentPackage for handling the import of dose-response data
Release Lineage
Entered 3.18 · Oct 25, 2023
Current · Requires R 4.6
Description
The package is a part of the gDR suite. It helps to prepare raw drug response data for downstream processing. It mainly contains helper functions for importing/loading/validating dose-response data provided in different file formats.
None published for Bioconductor
Test coverage
Line coverage
–
Expression
–
Tests / Examples
–
Functions
77 23 exported
Complexity
3.9 avg / 24 max
Call network
77 nodes / 99 edges
Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.
Call graph
Open call graph →Lowest coverage
Per-function coverage is not measured for this package yet.
Code
Structure
Lines of code
7,048
Files
219
Compiled share
0%
Has compiled src
No
Language breakdown
API
Exported functions
26
Internal functions
41
Recent export changes
Testing
Has tests
Yes
Test-to-code ratio
0.29
testthat edition
–
Docs
Roxygen coverage
100%
Health & Security signals
Informational signals; not verdicts.
on.exit coverage
0%
Unsafe pattern score
0
Dep constraint coverage
4.2%
Secret pattern count
0
Bundled 3rd-party code
2 items
Portability & License
Min R version
4.2
System requirements
–
C++ standard
–
License
Artistic-2.0
License flags
SPDX valid, OSI approved
History
Versions
6
First release
2023-10-24
Latest release
2026-04-28
Avg cadence
189 days
Cold removal rate
–
Dep drift
1
LOC over versions
Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.
Documentation
- Help pages
- 72 (9 internal)includes a package overview page
- Examples that run
- 100%26 run in a plain check
- Exported functions with examples
- 100%
- Documented parameters
- 100%
- Return-value docs
- 100%
- Help pages citing references
- 0%
Repository practices
6 development-tooling and community-health practices detected across 4 families in the upstream repository
Checks run against github.com/gdrplatform/gdrimport on 2026-10-21.
Datasets
| Name | Class | Size | Also in |
|---|---|---|---|
| H0109269D00 | – | – | – |
| H0109269D01 | – | – | – |
| H0309269D00 | – | – | – |
| H0309269D01 | – | – | – |
| H0409269D00 | – | – | – |
| H0409269D01 | – | – | – |
| H0509269D00 | – | – | – |
| H0509269D01 | – | – | – |
| H0609269D00 | – | – | – |
| H0609269D01 | – | – | – |
| H0709269D00 | – | – | – |
| H0709269D01 | – | – | – |
| H0809269D00 | – | – | – |
| H0809269D01 | – | – | – |
| H0909269D00 | – | – | – |
| H0909269D01 | – | – | – |
| H1109269D00 | – | – | – |
| H1109269D01 | – | – | – |
| H1209269D00 | – | – | – |
| H1209269D01 | – | – | – |
| H1409269D00 | – | – | – |
| H1409269D01 | – | – | – |
| K0209269D00 | – | – | – |
| K0209269D01 | – | – | – |
| K0809269D00 | – | – | – |
| K0809269D01 | – | – | – |
| K1009269D00 | – | – | – |
| K1009269D01 | – | – | – |
| Manifest | data.frame | 8 × 4 | No other package |
| RawData | data.frame | 1,920 × 5 | No other package |
| Template_trt | data.frame | 240 × 6 | No other package |
| Template_untrt | data.frame | 240 × 6 | No other package |
| ref_RawData_day0_day7_xlsx | data.frame | 4,608 × 5 | No other package |
| ref_RawData_day0_xlsx | data.frame | 2,304 × 5 | No other package |
| ref_template_treated_untreated_xlsx | data.frame | 768 × 7 | No other package |
| ref_template_treated_xlsx | data.frame | 384 × 7 | No other package |
Topics
Depended on by (1)
Bioconductor (1)
Suggested by (1)
People
- Arkadiusz Gladki author maintainer
- Bartosz Czech author
- Luca Gerosa author
- Marc Hafner author
- Sergiu Mocanu author
- Dariusz Scigocki author
- Janina Smola author
- Allison Vuong author
Cite
Cite this package
Run in R for the authors' preferred citation:
citation("gDRimport")This package has no citation file, so citation() returns this entry built from DESCRIPTION.
Cite the R Observatory
For a number measured here: a download total, a coverage figure, an archival date.
From data release v2026-10-25, which the citation names so these numbers can be found later. More on citing and the projects behind them.