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gDRtestData

Bioc current

gDRtestData - R data package with testing dose response data

v1.10.0 · experiment · Artistic-2.0

Release Lineage

Entered 3.18 · Oct 25, 2023

Current · Requires R 4.6

1.0 In 6 of 49 releases 3.23

Description

R package with internal dose-response test data. Package provides functions to generate input testing data that can be used as the input for gDR pipeline. It also contains qs2 files with MAE data processed by gDR.

Test coverage

Line coverage

Expression

Tests / Examples

Functions

17 14 exported

Complexity

1.3 avg / 3 max

Call network

17 nodes / 18 edges

Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.

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Lowest coverage

Per-function coverage is not measured for this package yet.

Code

Structure

Lines of code

1,135

Files

78

Compiled share

0%

Has compiled src

No

Language breakdown

R 513 (45.2%)Tests 16 (1.4%)Docs 471 (41.5%)Vignettes 135 (11.9%)

API

Exported functions

14

Internal functions

3

Recent export changes

v3.19+4 prepareCodilutionData, prepareComboMergedData, prepareData +1 more

Testing & CI

Has tests

Yes

Test-to-code ratio

0.03

testthat edition

3

CI present

Yes

CI type

["github-actions"]

PR gated

Yes

Docs

Roxygen coverage

100%

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

0%

Unsafe pattern score

0

Dep constraint coverage

0%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

4.2

System requirements

C++ standard

License

Artistic-2.0

License flags

SPDX valid, OSI approved

History

Versions

6

First release

2023-10-24

Latest release

2026-04-28

Avg cadence

189 days

Cold removal rate

Dep drift

1

LOC over versions

v3.18: 784 LOCv3.19: 1,135 LOCv3.20: 1,135 LOCv3.21: 1,135 LOCv3.22: 1,135 LOCv3.23: 1,135 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.

Documentation

Documentation
READMEYes · 64 wordsVignettesYes · dynamicpkgdown siteYesNEWSYes · 100% structuredCode of conductNoContributing guideNo
Examples that run
100%
Documented parameters
100%
Return-value docs
100%
References docs
0%

Topics

Depended on by (4)

Bioconductor (4)

People

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