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flowViz

Bioc current

Visualization for flow cytometry

v1.76.0 · software · Artistic-2.0

Release Lineage

Entered 2.0 · Apr 26, 2007

Current · Requires R 4.6

1.0 In 39 of 49 releases 3.23

Description

Provides visualization tools for flow cytometry data.

Test coverage

Line coverage

Expression

Tests / Examples

Functions

62 13 exported

Complexity

6.2 avg / 38 max

Call network

62 nodes / 55 edges

Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.

Loading call graph…

Lowest coverage

Per-function coverage is not measured for this package yet.

Code

Structure

Lines of code

10,920

Files

52

Compiled share

0%

Has compiled src

No

Language breakdown

R 7,522 (68.9%)Tests 57 (0.5%)Docs 2,331 (21.3%)Vignettes 1,010 (9.2%)

API

Exported functions

13

Internal functions

47

Testing & CI

Has tests

Yes

Test-to-code ratio

0.01

testthat edition

CI present

No

CI type

[]

PR gated

No

Docs

Roxygen coverage

100%

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

42.9%

Unsafe pattern score

0

Dep constraint coverage

5.6%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

2.7.0

System requirements

C++ standard

License

Artistic-2.0

License flags

SPDX valid, OSI approved

History

Versions

39

First release

2007-04-24

Latest release

2026-04-28

Avg cadence

182 days

Cold removal rate

100%

Dep drift

17

LOC over versions

v2.0: 1,368 LOCv2.1: 2,256 LOCv2.2: 5,291 LOCv2.3: 7,285 LOCv2.4: 7,326 LOCv2.5: 7,432 LOCv2.6: 7,463 LOCv2.7: 7,464 LOCv2.8: 7,464 LOCv2.9: 7,464 LOCv2.10: 7,464 LOCv2.11: 7,689 LOCv2.12: 7,819 LOCv2.13: 9,563 LOCv2.14: 8,970 LOCv3.0: 9,069 LOCv3.1: 9,087 LOCv3.2: 10,658 LOCv3.3: 10,659 LOCv3.4: 10,663 LOCv3.5: 10,673 LOCv3.6: 10,673 LOCv3.7: 10,673 LOCv3.8: 10,673 LOCv3.9: 10,673 LOCv3.10: 10,920 LOCv3.11: 10,920 LOCv3.12: 10,920 LOCv3.13: 10,920 LOCv3.14: 10,920 LOCv3.15: 10,920 LOCv3.16: 10,920 LOCv3.17: 10,920 LOCv3.18: 10,920 LOCv3.19: 10,920 LOCv3.20: 10,920 LOCv3.21: 10,920 LOCv3.22: 10,920 LOCv3.23: 10,920 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.

Documentation

Documentation
READMENoVignettesYes · dynamicpkgdown siteNoNEWSNoCode of conductNoContributing guideNo
Examples that run
100%
Documented parameters
63%
Return-value docs
40%
References docs
5%

Topics

Depended on by (15)

People

Mike Jiang

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("flowViz")

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

APA

Balamuta, J. J. (2026). R Observatory: Metrics for flowViz version 1.76.0 [Data set]. HJJB, LLC. Data release v2026-08-22. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-22, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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