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flowFP

Bioc current

Fingerprinting for Flow Cytometry

v1.70.0 · software · Artistic-2.0

Release Lineage

Entered 2.5 · Oct 28, 2009

Current · Requires R 4.6

1.0 In 34 of 49 releases 3.23

Description

Fingerprint generation of flow cytometry data, used to facilitate the application of machine learning and datamining tools for flow cytometry.

Test coverage

Line coverage

Expression

Tests / Examples

Functions

88 6 exported

Complexity

4.3 avg / 16 max

Call network

88 nodes / 106 edges

Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.

Loading call graph…

Lowest coverage

Per-function coverage is not measured for this package yet.

Code

Structure

Lines of code

5,951

Files

77

Compiled share

18.1%

Has compiled src

Yes

Language breakdown

R 2,010 (33.8%)C/C++/src 1,076 (18.1%)Tests 256 (4.3%)Docs 1,351 (22.7%)Vignettes 1,258 (21.1%)

API

Exported functions

6

Internal functions

36

Testing & CI

Has tests

Yes

Test-to-code ratio

0.13

testthat edition

CI present

No

CI type

[]

PR gated

No

Docs

Roxygen coverage

100%

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

100%

Unsafe pattern score

0

Dep constraint coverage

11.1%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

2.10

System requirements

C++ standard

License

Artistic-2.0

License flags

SPDX valid, OSI approved

History

Versions

34

First release

2009-10-27

Latest release

2026-04-28

Avg cadence

182 days

Cold removal rate

Dep drift

2

LOC over versions

v2.5: 4,666 LOCv2.6: 4,666 LOCv2.7: 4,666 LOCv2.8: 4,666 LOCv2.9: 4,680 LOCv2.10: 4,680 LOCv2.11: 4,680 LOCv2.12: 4,680 LOCv2.13: 4,680 LOCv2.14: 5,938 LOCv3.0: 5,938 LOCv3.1: 5,938 LOCv3.2: 5,938 LOCv3.3: 5,938 LOCv3.4: 5,938 LOCv3.5: 5,938 LOCv3.6: 5,938 LOCv3.7: 5,938 LOCv3.8: 5,938 LOCv3.9: 5,938 LOCv3.10: 5,938 LOCv3.11: 5,938 LOCv3.12: 5,949 LOCv3.13: 5,949 LOCv3.14: 5,949 LOCv3.15: 5,949 LOCv3.16: 5,951 LOCv3.17: 5,951 LOCv3.18: 5,951 LOCv3.19: 5,951 LOCv3.20: 5,951 LOCv3.21: 5,951 LOCv3.22: 5,951 LOCv3.23: 5,951 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.

Documentation

Documentation
READMENoVignettesYes · dynamicpkgdown siteNoNEWSNoCode of conductNoContributing guideNo
Examples that run
100%
Documented parameters
100%
Return-value docs
100%
References docs
27%

Topics

Depended on by (2)

Bioconductor (2)

People

Herb Holyst

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("flowFP")

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

APA

Balamuta, J. J. (2026). R Observatory: Metrics for flowFP version 1.70.0 [Data set]. HJJB, LLC. Data release v2026-08-22. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-22, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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