flowClust
Bioc currentClustering for Flow Cytometry
Release Lineage
Entered 2.2 · May 1, 2008
Current · Requires R 4.6
Description
Robust model-based clustering using a t-mixture model with Box-Cox transformation. Note: users should have GSL installed. Windows users: 'consult the README file available in the inst directory of the source distribution for necessary configuration instructions'.
None published for Bioconductor
Test coverage
Line coverage
–
Expression
–
Tests / Examples
–
Functions
42 10 exported
Complexity
10.5 avg / 69 max
Call network
42 nodes / 40 edges
Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.
Call graph
Open call graph →Lowest coverage
Per-function coverage is not measured for this package yet.
Code
Structure
Lines of code
8,220
Files
61
Compiled share
33.3%
Has compiled src
Yes
Language breakdown
API
Exported functions
19
Internal functions
9
Testing
Has tests
Yes
Test-to-code ratio
0.09
testthat edition
–
Docs
Roxygen coverage
94.7%
Health & Security signals
Informational signals; not verdicts.
on.exit coverage
0%
Unsafe pattern score
0
Dep constraint coverage
0%
Secret pattern count
0
Bundled 3rd-party code
2 items
Portability & License
Min R version
2.5.0
System requirements
1 externalGNU make
C++ standard
–
License
MIT
License flags
SPDX valid, OSI approved
History
Versions
37
First release
2008-06-04
Latest release
2026-04-28
Avg cadence
182 days
Cold removal rate
100%
Dep drift
21
LOC over versions
Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.
Documentation
- Help pages
- 22includes a package overview page
- Examples that run
- 100%3 run in a plain check
- Exported functions with examples
- 25%
- Documented parameters
- 100%
- Return-value docs
- 75%
- Help pages citing references
- 59%
Repository practices
Checks read the Bioconductor git repository (git.bioconductor.org), branch RELEASE_3_23.
2 practices detected in the Bioconductor git repository
Datasets
Topics
Depended on by (6)
Suggested by (5)
People (from the free-text Author field)
Cite
Cite this package
Run in R for the authors' preferred citation:
citation("flowClust")The package provides a citation file that builds its entry when R runs it. Run citation() to see it.
Cite the R Observatory
For a number measured here: a download total, a coverage figure, an archival date.
From data release v2026-10-21, which the citation names so these numbers can be found later. More on citing and the projects behind them.