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flowMerge

Bioc current

Cluster Merging for Flow Cytometry Data

v2.60.0 · software · Artistic-2.0

Release Lineage

Entered 2.5 · Oct 28, 2009

Current · Requires R 4.6

1.0 In 34 of 49 releases 3.23

Description

Merging of mixture components for model-based automated gating of flow cytometry data using the flowClust framework. Note: users should have a working copy of flowClust 2.0 installed.

Test coverage

Line coverage

Expression

Tests / Examples

Functions

19 9 exported

Complexity

3.3 avg / 9 max

Call network

19 nodes / 6 edges

Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.

Loading call graph…

Lowest coverage

Per-function coverage is not measured for this package yet.

Code

Structure

Lines of code

1,497

Files

34

Compiled share

0%

Has compiled src

No

Language breakdown

R 611 (40.8%)Docs 768 (51.3%)Vignettes 118 (7.9%)

API

Exported functions

11

Internal functions

10

Testing & CI

Has tests

No

Test-to-code ratio

0.00

testthat edition

CI present

No

CI type

[]

PR gated

No

Docs

Roxygen coverage

90.9%

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

0%

Unsafe pattern score

0

Dep constraint coverage

0%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

System requirements

C++ standard

License

Artistic-2.0

License flags

SPDX valid, OSI approved

History

Versions

34

First release

2009-10-27

Latest release

2026-04-28

Avg cadence

182 days

Cold removal rate

Dep drift

9

LOC over versions

v2.5: 1,117 LOCv2.6: 1,154 LOCv2.7: 1,178 LOCv2.8: 1,275 LOCv2.9: 1,362 LOCv2.10: 1,372 LOCv2.11: 1,373 LOCv2.12: 1,373 LOCv2.13: 1,373 LOCv2.14: 1,499 LOCv3.0: 1,499 LOCv3.1: 1,499 LOCv3.2: 1,499 LOCv3.3: 1,499 LOCv3.4: 1,499 LOCv3.5: 1,499 LOCv3.6: 1,499 LOCv3.7: 1,499 LOCv3.8: 1,499 LOCv3.9: 1,497 LOCv3.10: 1,497 LOCv3.11: 1,497 LOCv3.12: 1,497 LOCv3.13: 1,497 LOCv3.14: 1,497 LOCv3.15: 1,497 LOCv3.16: 1,497 LOCv3.17: 1,497 LOCv3.18: 1,497 LOCv3.19: 1,497 LOCv3.20: 1,497 LOCv3.21: 1,497 LOCv3.22: 1,497 LOCv3.23: 1,497 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.

Documentation

Documentation
READMENoVignettesYes · dynamicpkgdown siteNoNEWSNoCode of conductNoContributing guideNo
Examples that run
100%
Documented parameters
100%
Return-value docs
88%
References docs
69%

Topics

Depended on by (3)

Bioconductor (2)

CRAN (1)

People

Greg Finak

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("flowMerge")

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

APA

Balamuta, J. J. (2026). R Observatory: Metrics for flowMerge version 2.60.0 [Data set]. HJJB, LLC. Data release v2026-08-23. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-23, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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