compEpiTools
Bioc currentTools for computational epigenomics
Release Lineage
Entered 3.0 · Oct 14, 2014
Current · Requires R 4.6
Description
Tools for computational epigenomics developed for the analysis, integration and simultaneous visualization of various (epi)genomics data types across multiple genomic regions in multiple samples.
Test coverage
Line coverage
–
Expression
–
Tests / Examples
–
Functions
11 0 exported
Complexity
23.2 avg / 62 max
Call network
11 nodes / 1 edges
Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.
Call graph
Open call graph →Lowest coverage
Per-function coverage is not measured for this package yet.
Code
Structure
Lines of code
3,731
Files
76
Compiled share
0%
Has compiled src
No
Language breakdown
API
Exported functions
11
Internal functions
0
Testing & CI
Has tests
No
Test-to-code ratio
0.00
testthat edition
–
CI present
No
CI type
[]
PR gated
No
Docs
Roxygen coverage
–
Health & Security signals
Informational signals; not verdicts.
on.exit coverage
0%
Unsafe pattern score
18
Dep constraint coverage
0%
Secret pattern count
0
Bundled 3rd-party code
2 items
Portability & License
Min R version
3.1.1
System requirements
–
C++ standard
–
License
GPL
License flags
not SPDX, not OSI
History
Versions
24
First release
2015-03-30
Latest release
2026-04-28
Avg cadence
182 days
Cold removal rate
–
Dep drift
6
LOC over versions
Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.
Topics
People
- Mattia Furlan contributor maintainer
- Kamal Kishore author
- Mattia Pelizzola author
Cite
Cite this package
Run in R for the authors' preferred citation:
citation("compEpiTools")This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.
Cite the R Observatory
For a number measured here: a download total, a coverage figure, an archival date.
From data release v2026-08-25, which the citation names so these numbers can be found later. More on citing and the projects behind them.