Packages
28 packages on Bioconductor tagged Spatial or ExpressionData, most distinct IPs first
Spatial and ExpressionData in Topics
| Package | Maintainer | Category | Latest version | Distinct IPs a month | Needs |
|---|---|---|---|---|---|
| scRNAseq Collection of Public Single-Cell RNA-Seq DatasetsAaron Lun | Aaron Lun | experiment | 5 May 2026 | 2,314 | 121 |
| GSVAdata Data employed in the vignette of the GSVA packageRobert Castelo | Robert Castelo | experiment | 28 Jul 2026 | 955 | 78 |
| ExpressionAtlas Download datasets from EMBL-EBI Expression AtlasAnil Thanki | Anil Thanki | software | 28 Apr 2026 | 827 | 64 |
| GeuvadisTranscriptExpr Data package with transcript expression and bi-allelic genotypes from the GEUVADIS projectMalgorzata Nowicka | Malgorzata Nowicka | experiment | 5 May 2026 | 367 | 0 |
| M3DExampleData M3Drop Example DataTallulah Andrews | Tallulah Andrews | experiment | 5 May 2026 | 343 | 0 |
| rcellminerData rcellminerData: Molecular Profiles and Drug Response for the NCI-60 Cell LinesAugustin Luna | Augustin Luna | experiment | 5 May 2026 | 329 | 7 |
| HarmanData Data for the Harman packageJason Ross | Jason Ross | experiment | 5 May 2026 | 317 | 0 |
| CONFESSdata Example dataset for CONFESS packageDiana LOW | Diana LOW | experiment | 5 May 2026 | 311 | 0 |
| miRcompData Data used in the miRcomp packageMatthew N. McCall | Matthew N. McCall | experiment | 5 May 2026 | 308 | 1 |
| Fletcher2013a Gene expression data from breast cancer cells under FGFR2 signalling perturbationMauro Castro | Mauro Castro | experiment | 5 May 2026 | 294 | 21 |
| curatedBladderData Bladder Cancer Gene Expression AnalysisMarkus Riester | Markus Riester | experiment | 5 May 2026 | 288 | 12 |
| IHWpaper Reproduce figures in IHW paperNikos Ignatiadis | Nikos Ignatiadis | experiment | 5 May 2026 | 286 | 98 |
| mammaPrintData RGLists from the Glas and Buyse breast cancer studiesLuigi Marchionni | Luigi Marchionni | experiment | 5 May 2026 | 269 | 0 |
| PasillaTranscriptExpr Data package with transcript expression obtained with kallisto from pasilla knock-down RNA-Seq data from Brooks et al.Malgorzata Nowicka | Malgorzata Nowicka | experiment | 5 May 2026 | 268 | 0 |
| curatedBreastData Curated breast cancer gene expression data with survival and treatment informationLevi Waldron | Levi Waldron | experiment | 23 Jul 2026 | 268 | 77 |
| prostateCancerVarambally Prostate Cancer DataMark Dunning | Mark Dunning | experiment | 5 May 2026 | 267 | 7 |
| HumanAffyData GEO accession GSE64985 and ArrayExpress accession E-MTAB-62 as ExpressionSet objectsBrad Nelms | Brad Nelms | experiment | 5 May 2026 | 256 | 64 |
| curatedCRCData Colorectal Cancer Gene Expression AnalysisLevi Waldron | Levi Waldron | experiment | 5 May 2026 | 250 | 7 |
| CellMapperData Pre-processed data for use with the CellMapper packageBrad Nelms | Brad Nelms | experiment | 5 May 2026 | 235 | 65 |
| ccdata Data for Combination Connectivity Mapping (ccmap) PackageAlex Pickering | Alex Pickering | experiment | 5 May 2026 | 233 | 0 |
| KOdata LINCS Knock-Out Data PackageShana White | Shana White | experiment | 5 May 2026 | 215 | 0 |
| prostateCancerTaylor Prostate Cancer DataMark Dunning | Mark Dunning | experiment | 5 May 2026 | 214 | 7 |
| prostateCancerCamcap Prostate Cancer DataMark Dunning | Mark Dunning | experiment | 5 May 2026 | 209 | 7 |
| prostateCancerGrasso Prostate Cancer DataMark Dunning | Mark Dunning | experiment | 5 May 2026 | 209 | 7 |
| prostateCancerStockholm Prostate Cancer DataMark Dunning | Mark Dunning | experiment | 5 May 2026 | 196 | 7 |
| mAPKLData Gene expression data for testing of the package mAPKL. | no date on record | 178 | |||
| ABAData Averaged gene expression in human brain regions from Allen Brain Atlas | no date on record | 115 | |||
| alpineData Data for the alpine package vignette | no date on record | 95 |