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CellMapperData

Bioc current

Pre-processed data for use with the CellMapper package

v1.38.0 · Package record · experiment · Artistic-2.0

Release Lineage

Entered 3.4 · Oct 18, 2016

Current · Requires R 4.6

1.0 In 20 of 49 releases 3.23

Description

Experiment data package. Contains microarray data from several large expression compendia that have been pre-processed for use with the CellMapper package. This pre-processed data is recommended for routine searches using the CellMapper package.

Advisories

None published for Bioconductor

Code intelligence has not been computed for this package yet.

Code

Structure

Lines of code

219

Files

12

Compiled share

0%

Has compiled src

No

Language breakdown

Docs 64 (29.2%)Vignettes 155 (70.8%)

API

Exported functions

0

Internal functions

0

Testing

Has tests

No

Test-to-code ratio

–

testthat edition

–

Docs

Roxygen coverage

–

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

–

Unsafe pattern score

0

Dep constraint coverage

0%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

–

System requirements

–

C++ standard

–

License

Artistic-2.0

License flags

SPDX valid, OSI approved

History

Versions

20

First release

2016-10-17

Latest release

2026-04-28

Avg cadence

182 days

Cold removal rate

–

Dep drift

0

LOC over versions

v3.4: 219 LOCv3.5: 219 LOCv3.6: 219 LOCv3.7: 219 LOCv3.8: 219 LOCv3.9: 219 LOCv3.10: 219 LOCv3.11: 219 LOCv3.12: 219 LOCv3.13: 219 LOCv3.14: 219 LOCv3.15: 219 LOCv3.16: 219 LOCv3.17: 219 LOCv3.18: 219 LOCv3.19: 219 LOCv3.20: 219 LOCv3.21: 219 LOCv3.22: 219 LOCv3.23: 219 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.

Documentation

In the Bioconductor 3.23 release
READMENoVignettesYes · 1 · dynamicNEWSYes · 0% structuredCitation fileYes · cites a publicationWebsitenot declared in DESCRIPTION
Help pages
1includes a package overview page
Examples that run
100%1 run in a plain check
Exported functions with examples
not tracked
Documented parameters
not tracked
Return-value docs
not tracked
Help pages citing references
100%

Repository practices

Bioconductor git repository

Checks read the Bioconductor git repository (git.bioconductor.org), branch RELEASE_3_23.

No development-tooling practices detected in the Bioconductor git repository.

Datasets

Bundled datasets · 1
NameClassSizeAlso in
metadatadata.frame6 × 16No other package

All of CellMapperData's data objects

Topics

Maintainer
Brad Nelms

Available on

CRANr2uBioconductorautoCRANCOPR

Suggested by (1)

People (from the free-text Author field)

Cite

Cite this package

Run in R for the authors' entry:

citation("CellMapperData")

The package provides a citation file, so citation() returns the authors' own entry.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

APA

Balamuta, J. J. (2026). R Observatory: Metrics for CellMapperData version 1.38.0 [Data set]. HJJB, LLC. Data release v2026-10-18. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-18, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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