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Topic: MassSpectrometry or DNAMethylation or Proteomics

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14 packages on Bioconductor tagged MassSpectrometry or DNAMethylation or Proteomics, most distinct IPs first

MassSpectrometry, DNAMethylation and Proteomics in Topics

PackageMaintainerCategoryLatest versionDistinct IPs a monthNeeds
TCGAbiolinks
TCGAbiolinks: An R/Bioconductor package for integrative analysis with GDC dataTiago Chedraoui Silva		Tiago Chedraoui Silvasoftware28 Apr 20266,750103
TOAST
Tools for the analysis of heterogeneous tissuesZiyi Li		Ziyi Lisoftware28 Apr 20261,454102
TPP
Analyze thermal proteome profiling (TPP) experimentsDorothee Childs		Dorothee Childssoftware14 Sep 20261,22186
TurboNorm
A fast scatterplot smoother suitable for microarray normalizationMaarten van Iterson		Maarten van Itersonsoftware28 Apr 20261,00618
topdownr
Investigation of Fragmentation Conditions in Top-Down ProteomicsSebastian Gibb		Sebastian Gibbsoftware28 Apr 2026856137
TargetSearch
A package for the analysis of GC-MS metabolite profiling dataAlvaro Cuadros-Inostroza		Alvaro Cuadros-Inostrozasoftware28 Apr 20268398
treekoR
Cytometry Cluster Hierarchy and Cellular-to-phenotype AssociationsAdam Chan		Adam Chansoftware28 Apr 2026775185
TPP2D
Detection of ligand-protein interactions from 2D thermal profiles (DLPTP)Nils Kurzawa		Nils Kurzawasoftware28 Apr 202675556
timeOmics
Time-Course Multi-Omics data integrationAntoine Bodein		Antoine Bodeinsoftware28 Apr 202673388
TargetDecoy
Diagnostic Plots to Evaluate the Target Decoy ApproachElke Debrie		Elke Debriesoftware28 Apr 2026695124
TENET
R package for TENET (Tracing regulatory Element Networks using Epigenetic Traits) to identify key transcription factorsRhie Lab at the University of Southern California		Rhie Lab at the University of Southern Californiasoftware28 Apr 2026508210
tidyexposomics
Integrated Exposure-Omics Analysis Powered by Tidy PrinciplesJason Laird		Jason Lairdsoftware28 Apr 2026476239
toppgene
Gene List Enrichment Analysis using the ToppGene SuitePariksheet Nanda		Pariksheet Nandasoftware3 Aug 202621357
tofsimsData
Import, process and analysis of ToF-SIMS imaging dataLorenz Gerber		Lorenz Gerberexperiment5 May 20261890