Packages

28 packages on Bioconductor, most distinct IPs first

Package	Maintainer	Category	Latest version	Distinct IPs a month	Needs
GenomeInfoDbData Species and taxonomy ID look up tables used by GenomeInfoDbBioconductor Maintainer	Bioconductor Maintainer	annotation	no date on record	36,797	0
GO.db A set of annotation maps describing the entire Gene OntologyBioconductor Package Maintainer	Bioconductor Package Maintainer	annotation	no date on record	33,694	42
graph graph: A package to handle graph data structuresBioconductor Package Maintainer	Bioconductor Package Maintainer	software	28 Apr 2026	25,655	7
GEOquery Get data from NCBI Gene Expression Omnibus (GEO)Sean Davis	Sean Davis	software	25 Oct 2026	15,960	73
genefilter genefilter: methods for filtering genes from high-throughput experimentsBioconductor Package Maintainer	Bioconductor Package Maintainer	software	28 Apr 2026	15,340	52
geneplotter Graphics related functions for BioconductorBioconductor Package Maintainer	Bioconductor Package Maintainer	software	28 Apr 2026	4,912	48
globaltest Testing Groups of Covariates/Features for Association with a Response Variable, with Applications to Gene Set TestingJelle Goeman	Jelle Goeman	software	28 Apr 2026	2,842	50
GOstats Tools for manipulating GO and microarraysBioconductor Package Maintainer	Bioconductor Package Maintainer	software	28 Apr 2026	2,437	63
gcrma Background Adjustment Using Sequence InformationZ. Wu	Z. Wu	software	28 Apr 2026	2,285	21
GlobalAncova Global test for groups of variables via model comparisonsManuela Hummel	Manuela Hummel	software	28 Apr 2026	2,062	70
GeneMeta MetaAnalysis for High Throughput ExperimentsBioconductor Package Maintainer	Bioconductor Package Maintainer	software	28 Apr 2026	1,238	53
GLAD Gain and Loss Analysis of DNAPhilippe Hupe	Philippe Hupe	software	28 Apr 2026	1,085	4
gpls Classification using generalized partial least squaresBioconductor Package Maintainer	Bioconductor Package Maintainer	software	28 Apr 2026	1,045	1
GraphAT Graph Theoretic Association TestsThomas LaFramboise	Thomas LaFramboise	software	28 Apr 2026	1,023	21
goTools Functions for Gene Ontology databaseAgnes Paquet	Agnes Paquet	software	28 Apr 2026	882	43
geneRecommender A gene recommender algorithm to identify genes coexpressed with a query set of genesGreg Hather	Greg Hather	software	28 Apr 2026	821	7
genArise Microarray Analysis toolIFC Development Team	IFC Development Team	software	28 Apr 2026	799	11
GeneticsPed Pedigree and genetic relationship functionsDavid Henderson	David Henderson	software	28 Apr 2026	684	11
GGtools software and data for analyses in genetics of gene expression			no date on record	536
grasp2db grasp2db, sqlite wrap of GRASP 2.0VJ Carey	VJ Carey	annotation	no date on record	506	66
gaggle Broadcast data between R and Gaggle			no date on record	489
GeuvadisTranscriptExpr Data package with transcript expression and bi-allelic genotypes from the GEUVADIS projectMalgorzata Nowicka	Malgorzata Nowicka	experiment	5 May 2026	367	0
genomewidesnp6Crlmm Metadata for fast genotyping with the 'crlmm' packageBenilton S Carvalho	Benilton S Carvalho	annotation	no date on record	299	1
genomewidesnp5Crlmm Metadata for fast genotyping with the 'crlmm' packageBenilton S Carvalho	Benilton S Carvalho	annotation	no date on record	261	1
GeneticsDesign Functions for designing genetics studies			no date on record	257
gp53cdf gp53cdfBioconductor Package Maintainer	Bioconductor Package Maintainer	annotation	no date on record	246	42
GGHumanMethCancerPanelv1.db Illumina Golden Gate Human Methylation Cancer Panel Version 1 annotation data (chip GGHumanMethCancerPanelv1)Sean Davis	Sean Davis	annotation	no date on record	240	47
geneplast.data.string.v91 Input data for the geneplast packageSheyla Trefflich	Sheyla Trefflich	annotation	no date on record	108	0