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Topic: MassSpectrometry or ImmunoOncology or Software

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259 packages on Bioconductor tagged MassSpectrometry or ImmunoOncology or Software, most distinct IPs first

MassSpectrometry, ImmunoOncology and Software in Topics

PackageMaintainerCategoryLatest versionDistinct IPs a monthNeeds
BiocVersion
Set the appropriate version of Bioconductor packagesBioconductor Package Maintainer		Bioconductor Package Maintainersoftware30 Oct 202578,5530
BiocGenerics
S4 generic functions used in BioconductorHervé Pagès		Hervé Pagèssoftware14 May 202674,5745
Biobase
Biobase: Base functions for BioconductorBioconductor Package Maintainer		Bioconductor Package Maintainersoftware28 Apr 202664,5556
BiocParallel
Bioconductor facilities for parallel evaluationJiefei Wang		Jiefei Wangsoftware29 Apr 202659,78012
Biostrings
Efficient manipulation of biological stringsHervé Pagès		Hervé Pagèssoftware2 Sep 202658,96214
BiocFileCache
Manage Files Across SessionsLori Shepherd		Lori Shepherdsoftware28 Apr 202629,41641
biomaRt
Interface to BioMart databases (i.e. Ensembl)Hugo Gruson		Hugo Grusonsoftware28 Apr 202624,57161
BiocIO
Standard Input and Output for Bioconductor PackagesMarcel Ramos		Marcel Ramossoftware28 Apr 202622,8999
beachmat
Compiling Bioconductor to Handle Each Matrix TypeAaron Lun		Aaron Lunsoftware28 Apr 202622,12123
BiocSingular
Singular Value Decomposition for Bioconductor PackagesAaron Lun		Aaron Lunsoftware8 Oct 202618,88037
BiocNeighbors
Nearest Neighbor Detection for Bioconductor PackagesAaron Lun		Aaron Lunsoftware28 Apr 202616,61924
BiocBaseUtils
Utility and internal functions for Bioconductor packagesMarcel Ramos		Marcel Ramossoftware28 May 202615,5122
BSgenome
Software infrastructure for efficient representation of full genomes and their SNPsHervé Pagès		Hervé Pagèssoftware28 Apr 202614,37557
bluster
Clustering Algorithms for BioconductorAaron Lun		Aaron Lunsoftware28 Apr 202610,90344
BiocStyle
Standard styles for vignettes and other Bioconductor documentsBioconductor Package Maintainer		Bioconductor Package Maintainersoftware28 Apr 20268,69032
biocmake
CMake for BioconductorAaron Lun		Aaron Lunsoftware28 Apr 20267,9074
biomformat
An interface package for the BIOM file formatPaul J. McMurdie		Paul J. McMurdiesoftware28 Apr 20267,8379
biovizBase
Basic graphic utilities for visualization of genomic data.Michael Lawrence		Michael Lawrencesoftware28 Apr 20266,487126
biocViews
Categorized views of R package repositoriesBioconductor Package Maintainer		Bioconductor Package Maintainersoftware28 Apr 20265,92717
batchelor
Single-Cell Batch Correction MethodsAaron Lun		Aaron Lunsoftware28 Apr 20265,72056
basilisk
Freezing Python Dependencies Inside Bioconductor PackagesAaron Lun		Aaron Lunsoftware28 Apr 20265,63021
BSgenome.Hsapiens.UCSC.hg38
Full genomic sequences for Homo sapiens (UCSC genome hg38)Bioconductor Package Maintainer		Bioconductor Package Maintainerannotationno date on record4,98960
bumphunter
Bump HunterTamilselvi Guharaj		Tamilselvi Guharajsoftware28 Apr 20264,26883
basilisk.utils
Centralized Conda Installation for Bioconductor PackagesAaron Lun		Aaron Lunsoftware28 Apr 20263,3875
BiocCheck
Bioconductor-specific package checksMarcel Ramos		Marcel Ramossoftware2 Jul 20263,36074
BSgenome.Hsapiens.UCSC.hg19
Full genome sequences for Homo sapiens (UCSC version hg19, based on GRCh37.p13)Bioconductor Package Maintainer		Bioconductor Package Maintainerannotationno date on record2,84258
bsseq
Analyze, manage and store whole-genome methylation dataKasper Daniel Hansen		Kasper Daniel Hansensoftware28 Apr 20262,71889
bamsignals
Extract read count signals from bam filesJohannes Helmuth		Johannes Helmuthsoftware21 May 20262,20214
BSgenome.Mmusculus.UCSC.mm10
Full genome sequences for Mus musculus (UCSC version mm10, based on GRCm38.p6)Bioconductor Package Maintainer		Bioconductor Package Maintainerannotationno date on record2,15258
ballgown
Flexible, isoform-level differential expression analysisJack Fu		Jack Fusoftware4 Nov 20251,84487