R Observatory: Metrics for nlmixr2rpt version 0.2.3

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

nlmixr2rpt

0.2.3Package record

Templated Word and PowerPoint Reporting of 'nlmixr2' Fitting Results

0packages dependsuggested by 1

4.5Kdownloads / year

71.3%test coverage

12/13flavors OK

Overview

About

Maintained by John HarroldCRAN page ↗GitHub ↗Website ↗Issues ↗

This allows you to generate reporting workflows around 'nlmixr2' analyses with outputs in Word and PowerPoint. You can specify figures, tables and report structure in a user-definable 'YAML' file. Also you can use the internal functions to access the figures and tables to allow their including in other outputs (e.g. R Markdown).

Changes in 0.2.3

Added support for modal diagrams via nlmixr2plot and also model equations

From NEWS.md in the release

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)

install.packages("nlmixr2rpt", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("nlmixr2/nlmixr2rpt")

Development version from nlmixr2/nlmixr2rpt. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-nlmixr2rpt

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled. We list this channel from recorded r2u download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-nlmixr2rpt

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

Health

CRAN checks

1ERROR12OK

Check messages

ERRORtestsr-oldrel-windows-x86_64

Running 'testthat.R' [51s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > # This file is part of the standard setup for testthat.
  > # It is recommended that you do not modify it.
  > #
  > # Where should you do additional test configuration?
  > # Learn more about the roles of various files in:
  > # * https://r-pkgs.org/tests.html
  > # * https://testthat.r-lib.org/reference/test_package.html#special-files
  > 
  > library(testthat)
  > library(nlmixr2rpt)
  > 
  > test_check("nlmixr2rpt")

CRAN check page ↗

Slowest check: 4.5 min · r-devel-windows-x86_64

Status changes

ERROR12 OK, 1 ERROR2026-09-11
OK13 OK2026-09-09
ERROR10 OK, 1 NOTE, 2 ERROR2026-08-04
NOTE12 OK, 1 NOTE2026-08-01
OK13 OK2026-07-27

Show 8 earlier changesHide 8 earlier changes

ERROR12 OK, 1 ERROR2026-07-18
OK13 OK2026-07-10
ERROR12 OK, 1 ERROR2026-07-08
OK13 OK2026-07-05
ERROR11 OK, 2 ERROR2026-06-08
OK13 OK2026-06-06
ERROR12 OK, 1 ERROR2026-05-30
OK14 OK2026-03-10

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 0.2.3

READMEYes · 316 wordsVignettesYes · 2 · dynamicNEWSYes · 100% structured · mentions 0.2.3Citation fileNoWebsiteYes · pkgdown

Help pages: 15
Examples that run: 80%12 run in a plain check · 3 only when donttest examples are enabled (R CMD check --as-cran)
Exported functions with examples: 100%
Documented parameters: 99%
Return-value docs: 100%
Help pages citing references: 0%

Vignettes (2)

Accessing Figures and Tables HTML
Reporting nlmixr2 Fit Results HTML

How these are measured

Downloads

4.5K

CRAN downloads in the past year

Rank #5,503 · ~12/day · ~373/mo

Releases R versions

Daily download trend is not available in this view yet.

63730 days

1.5K90 days

4.5K1 year

Compare downloads with other packages →

Also on103 r2u45 c2d4u

How downloads are counted

Repository

nlmixr2/nlmixr2rpt ↗Organization: nlmixr2

5Stars

1Forks

1Open issues

0Open PRs

2Releases

106Commits

3Commit identities

License file reads as GPL-3.0 · 106 commits · Last activity 2026-09-25 · Discussions: 1 post

Responsiveness

How these are sampled

PRs merged (all time): 100%
Median days to close, 50 most recently updated closed issues: not measured
Median days to close, 50 most recently updated closed PRs: 0

Commits over time

2026-07-19 · 982026-09-27 · 106

How these are measured

PracticesBeta

5 development-tooling and community-health practices detected across 2 families in the upstream repository

Checks run against github.com/nlmixr2/nlmixr2rpt on 2026-10-21.

Continuous integration (2)

GitHub ActionsR CMD check workflow

The R CMD check workflow runs on Linux

Docs source (3)

README.Rmdpkgdown

GitHub Pages site last deployed 2026-09-26

pkgdown site last built 2025-10-11, before release 0.2.3 (2026-09-26)

How this is detected·Detection ruleset v4 (2026-10-20)

AI coding toolsBeta

This repository shows signs of AI coding tools.

Claude Codefirst seen 2026-08-27
Commits: at least 1 crediting it in the message

Models named in its commits

Claude Opus 51 commit · Aug 2026

Counts are commits, not lines of code. Commits by a tool's accounts count once across all of its accounts. Commits crediting it are the largest count among its credit lines, a minimum.How this is detected·Detection ruleset v4 (updated 2026-09-27)

Dependencies

Declared dependencies

20 external dependencies (excludes base and recommended)

Installing nlmixr2rpt adds 159 packages (92 with compiled code, 145 MB of source tarballs). Heaviest: BH 14 MB, stringi 11 MB, ggplot2 6.0 MB.

Depends (0)

none

Imports (18)

cli dplyr equatags flextable ggforce ggpubr ggplot2grDevicesknitr stringr nlmixr2est nlmixr2extra onbrand rxode2utilsxpose xpose.nlmixr2 yaml

LinkingTo (0)

none

Suggests (4)

rmarkdown GGally ggPMX testthat

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Suggested by 1

Suggests, most downloaded first

nlmixr2

How these are counted

Code & Tests

People & History

People (1)

John Harrold

Author, Maintainer since 0.1.0 (2022)

Releases (5)

Pick two releases to compare their code metrics.

0.2.3Latest
record
2026-09-26 · current release · diff ↗ ·
added 1 export
gen_eqn_table
R
R 4.6.0 released · 2026-04-24
0.2.2
record
2025-10-11 · diff ↗ ·
added 1 export
safe_text
0.2.1
record
2025-07-17 · diff ↗
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
0.2.0
record
2023-06-06 · diff ↗
R
R 4.3.0 released · 2023-04-21
0.1.0
record
2022-12-05
R
R 4.2.0 released · 2022-04-22

Package metadata

First published: 2022-12-05
Total releases: 5 / 4 yrs
License: GPL (>= 3) OSI
Download size: 1.6 MB

Appears in task views

Analysis of Pharmacokinetic Data

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("nlmixr2rpt")

Format

Harrold, J. (2026). nlmixr2rpt: Templated Word and PowerPoint Reporting of 'nlmixr2' Fitting Results (Version 0.2.3) [Computer software]. https://doi.org/10.32614/CRAN.package.nlmixr2rpt

This package has no citation file, so citation() returns this entry built from DESCRIPTION.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for nlmixr2rpt version 0.2.3 [Data set]. HJJB, LLC. Data release v2026-10-23. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-23, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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