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PhenotypeR

Assess Study Cohorts Using a Common Data Model

v0.3.4 · Mar 25, 2026 · Apache License (>= 2)

Description

Phenotype study cohorts in data mapped to the Observational Medical Outcomes Partnership Common Data Model. Diagnostics are run at the database, code list, cohort, and population level to assess whether study cohorts are ready for research.

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CRAN Check Status

14 OK
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Flavor Status
r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Dependency Network

Dependencies Reverse dependencies cli clock CodelistGenerator CohortCharacteristics CohortConstructor dplyr DrugUtilisation IncidencePrevalence (>= 1.2.0) MeasurementDiagnostics omopgenerics (>= 1.2.0) OmopSketch PatientProfiles purrr readr rlang +1 more dependencies PhenotypeR

Version History

updated 0.3.4 ← 0.3.3 diff Mar 25, 2026
new 0.3.3 Mar 10, 2026
updated 0.3.3 ← 0.3.2 diff Feb 22, 2026
updated 0.3.2 ← 0.3.1 diff Feb 7, 2026
updated 0.3.1 ← 0.3.0 diff Jan 27, 2026
updated 0.3.0 ← 0.2.0 diff Jan 11, 2026
updated 0.2.0 ← 0.1.6 diff Jul 30, 2025
updated 0.1.6 ← 0.1.5 diff Jun 21, 2025
updated 0.1.5 ← 0.1.4 diff May 21, 2025
updated 0.1.4 ← 0.1.3 diff Mar 27, 2025
updated 0.1.3 ← 0.1.2 diff Feb 16, 2025
updated 0.1.2 ← 0.1.1 diff Feb 4, 2025
updated 0.1.1 ← 0.1.0 diff Jan 16, 2025
new 0.1.0 Dec 5, 2024