January 2020 in CRAN

Part of Q1 2020 and 2020.

Final

115

New packages

958

Updated

Archived

128.3M

Downloads

New packages (60+)

ppmHR Privacy-Protecting Hazard Ratio Estimation in Distributed Data Networks	2020-01-07
PROJ Generic Coordinate System Transformations Using 'PROJ'	2020-01-07
conjurer A Parametric Method for Generating Synthetic Data	2020-01-07
transplantr Audit and Research Functions for Transplantation	2020-01-07
syslognet Send Log Messages to Remote 'syslog' Server	2020-01-08
akc Automatic Knowledge Classification	2020-01-08
jfa Statistical Methods for Auditing	2020-01-08
mlr3viz Visualizations for 'mlr3'	2020-01-08
publipha Bayesian Meta-Analysis with Publications Bias and P-Hacking	2020-01-08
r2sundials Wrapper for 'SUNDIALS' Solving ODE and Sensitivity Problem	2020-01-08
wrProteo Proteomics Data Analysis Functions	2020-01-08
PenIC Semiparametric Regression Analysis of Interval-Censored Data using Penalized Splines	2020-01-09
FABInference FAB p-Values and Confidence Intervals	2020-01-09
bggum Bayesian Estimation of Generalized Graded Unfolding Model Parameters	2020-01-09
cbq Conditional Binary Quantile Models	2020-01-09
echelon The Echelon Analysis and the Detection of Spatial Clusters using Echelon Scan Method	2020-01-09
fasstr Analyze, Summarize, and Visualize Daily Streamflow Data	2020-01-09
mbsts Multivariate Bayesian Structural Time Series	2020-01-09
mcp Regression with Multiple Change Points	2020-01-09
pcts Periodically Correlated and Periodically Integrated Time Series	2020-01-09
riceidconverter Convert Biological ID from RAP or MSU to SYMBOL for Oryza Sativa	2020-01-09
shinyloadtest Load Test Shiny Applications	2020-01-09
xnet Two-Step Kernel Ridge Regression for Network Predictions	2020-01-09
MLMOI Estimating Frequencies, Prevalence and Multiplicity of Infection	2020-01-10
ldaPrototype Prototype of Multiple Latent Dirichlet Allocation Runs	2020-01-10
skedastic Handling Heteroskedasticity in the Linear Regression Model	2020-01-10
varTestnlme Variance Components Testing for Linear and Nonlinear Mixed Effects Models	2020-01-10
babette Control 'BEAST2'	2020-01-11
BioPETsurv Biomarker Prognostic Enrichment Tool for Time-to-Event Trial	2020-01-12
sanzo Color Palettes Based on the Works of Sanzo Wada	2020-01-12
fcaR Formal Concept Analysis	2020-01-12
modelbased Estimation of Model-Based Predictions, Contrasts and Means	2020-01-12
optimalThreshold Bayesian Methods for Optimal Threshold Estimation	2020-01-13
BRL Beta Record Linkage	2020-01-13
lncDIFF Long Non-Coding RNA Differential Expression Analysis	2020-01-13
Boptbd Bayesian Optimal Block Designs	2020-01-13
apyramid Visualize Population Pyramids Aggregated by Age	2020-01-13
atakrig Area-to-Area Kriging	2020-01-13
cSEM Composite-Based Structural Equation Modeling	2020-01-13
cuRe Parametric Cure Model Estimation	2020-01-13
extRC Extended RC Models for Contingency Tables	2020-01-13
hrcomprisk Nonparametric Assessment Between Competing Risks Hazard Ratios	2020-01-13
nlraa Nonlinear Regression for Agricultural Applications	2020-01-13
outForest Multivariate Outlier Detection and Replacement	2020-01-13
s2net The Generalized Semi-Supervised Elastic-Net	2020-01-13
serpstatr 'Serpstat' API Wrapper	2020-01-13
survParamSim Parametric Survival Simulation with Parameter Uncertainty	2020-01-13
themis Extra Recipes Steps for Dealing with Unbalanced Data	2020-01-13
impactflu Quantification of Population-Level Impact of Vaccination	2020-01-14
ROMDB Get 'OMDB' API Multiple Information	2020-01-14
dppmix Determinantal Point Process Mixture Models	2020-01-14
forestError A Unified Framework for Random Forest Prediction Error Estimation	2020-01-14
metan Multi Environment Trials Analysis	2020-01-14
nosoi A Forward Agent-Based Transmission Chain Simulator	2020-01-14
statgenSTA Single Trial Analysis (STA) of Field Trials	2020-01-14
tidyREDCap Helper Functions for Working with 'REDCap' Data	2020-01-14
warp Group Dates	2020-01-14
yager Yet Another General Regression Neural Network	2020-01-14
carat Covariate-Adaptive Randomization for Clinical Trials	2020-01-15
covglasso Sparse Covariance Matrix Estimation	2020-01-15

Archived / removed

Why

12 nothing now depends on it
11 the request of the maintainer
8 check issues were not corrected in time. 'Additional issues'
7 check errors were not corrected in time. Detritus with variable names
4 check issues were not corrected in time
3 check problems were not corrected in time
3 depends on archived package 'aws.s3'
3 maintainer email address bounced

cloudSimplifieR depends on archived package 'aws.s3'	2020-01-31
flyio depends on archived package 'aws.s3'	2020-01-31
rSymbiota requires archived package 'RSelenium'	2020-01-31
redshiftTools depends on archived package 'aws.s3'	2020-01-31
statarepl requires archived package 'subprocess'	2020-01-31
subprocess the request of the maintainer. After giving notice to revdeps. He said 'processx' was a suitable replacement	2020-01-31
AHR intermittent check problems were not addressed. Tried to call 'stats::approxfun' with 'zero-NA points'	2020-01-30
AutoModel depends on archived package 'rowr'	2020-01-28
ElemStatLearn Archived on 2020-01-28.	2020-01-28
RtextSummary depends on archived package 'Matrix.utils'	2020-01-28
listless check problems were not corrected despite reminders	2020-01-28
rowr check problems were not corrected despite reminders	2020-01-28
Smisc check problems were not corrected in time	2020-01-26
rsed requires archived package 'Smisc'	2020-01-26
Emcdf the request of the maintainer	2020-01-25
attrCUSUM check problems were not corrected in time	2020-01-24
parsetools check errors were not corrected despite reminders	2020-01-24
BMhyb maintainer email address bounced	2020-01-20
BMhyd maintainer email address bounced	2020-01-20
IPtoCountry requires 'dtables' by the same author	2020-01-20
TED maintainer email address bounced	2020-01-20
dtables check issues were not corrected in time	2020-01-20
JuniperKernel check issues were not corrected in time. Unstated system requirement of zeromq (which would not be required by a binary installation of package 'pbdZMQ'). CRLF headers Use of '/bin/bash'	2020-01-19
CaliCo check issues were not corrected in time. Missing 'Rcpp' dependencies	2020-01-16
DZEXPM check issues were not corrected in time. 'Additional issues'	2020-01-16
MetamapsDB it requires archived package 'rgexf'	2020-01-16
PET check errors were not corrected in time. '-fno-common'	2020-01-16
RClimMAWGEN depends on archived package 'climdex.pcic'	2020-01-16
SWATmodel check issues were not corrected in time	2020-01-16
bclust check issues were not corrected in time. 'Additional issues'	2020-01-16
bigIntegerAlgos check issues were not corrected in time	2020-01-16
bpkde check issues were not corrected in time. 'Additional issues'	2020-01-16
discrimARTs check issues were not corrected in time. 'Additional issues'	2020-01-16
formulize check errors were not corrected in time	2020-01-16
gitter maintainer's email address bounced and it requires archived package 'PET'	2020-01-16
iki.dataclim depends on archived package 'climdex.pcic'	2020-01-16
kerasformula check issues were not corrected in time. Issues include not declaring python and overflowing file descriptors	2020-01-16
mljar check issues were not corrected in time. Did not allow for '.' in 'tempdir()' name (as documented)	2020-01-16
multilevelMatching check issues were not corrected in time. 'Additional issues'	2020-01-16
nlr check issues were not corrected in time. 'Additional issues'	2020-01-16
noncensus check issues were not corrected in time	2020-01-16
rbamtools check issues were not corrected in time. Installation error with clang 10.0.0	2020-01-16
refGenome check issues were not corrected in time. Installation error with clang 10.0.0, valgrind detect array overrun	2020-01-16
sme check issues were not corrected in time. 'Additional issues'	2020-01-16
spartan check issues were not corrected in time. 'Additional issues'	2020-01-16
RANN.L1 nothing depends on it	2020-01-15
protiq nothing depended on it	2020-01-15
BayHap check errors were not corrected in time. Detritus with variable names	2020-01-14
DEMEtics check errors were not corrected in time. Detritus with variable names	2020-01-14
GraphFactor check errors were not corrected in time. Detritus with variable names	2020-01-14
NORRRM maintainer's address bounced	2020-01-14
RJaCGH check errors were not corrected in time. Detritus with variable names	2020-01-14
SchemaOnRead maintainer's address bounced	2020-01-14
inspectr check errors were not corrected in time. Detritus with variable names	2020-01-14
nscprepr check errors were not corrected in time. Detritus with variable names	2020-01-14
plotGoogleMaps check errors were not corrected in time. Detritus with variable names	2020-01-14
SDMTools no maintainer to fix issues	2020-01-12
aws.cloudtrail the request of the maintainer	2020-01-12
aws.ses the request of the maintainer	2020-01-12
aws.sns the request of the maintainer	2020-01-12

Downloads

128.3M

Total downloads

+16.8%

vs prior period

Notable

Major version jumps

cppRouting 1.2→2.0 tidylog 0.2.0→1.0.0 cobalt 3.9.0→4.0.0 compareDF 1.8.0→2.0.0 survELtest 1.0.1→2.0.0 vtree 3.0.0→4.0.0 CensSpatial 1.3→2.1 MomTrunc 4.59→5.57 NACHO 0.6.1→1.0.0 diagonals 0.4.0→1.0.1 docknitr 0.4.0→1.0.1 lqr 1.7→2.0 microseq 1.3→2.0 usl 1.8.0→2.0.0 V8 2.3→3.0 maSAE 0.1-5→1.0.0 nph 1.9→2.0 pmxTools 0.1.3→1.0 qrLMM 1.3→2.0 qrNLMM 1.4→2.0

First-time CRAN authors

John Asher Sidharth Macherla James Almgren-Bell Cody J. Balos ×2 Lawrence E. Banks George Byrne Scott D. Cohen ×2 Aaron Collier ×2 Koen Derks ×3 David J. Gardner ×2 Keith E. Grant Tian-Yuan Huang ×4 Steven L. Lee Shelby L. Lockhart John Loffeld Lotte Mensink Slaven Peles ×2 Cosmin Petra Federica Picogna Daniel R. Reynolds ×2