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microseq

Basic Biological Sequence Handling

v2.1.7 · Sep 18, 2025 · GPL-2
CRAN GitHub Mirror

Description

Basic functions for microbial sequence data analysis. The idea is to use generic R data structures as much as possible, making R data wrangling possible also for sequence data.

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CRAN Check Status

14 OK
Show all 14 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Reverse Dependencies (2)

depends

micropan

imports

Rsearch

Dependency Network

Dependencies Reverse dependencies tibble stringr dplyr rlang Rcpp data.table micropan Rsearch microseq

Version History

new 2.1.7 Mar 10, 2026
updated 2.1.7 ← 2.1.6 diff Sep 17, 2025
updated 2.1.6 ← 2.1.5 diff Aug 20, 2023
updated 2.1.5 ← 2.1.4 diff Oct 29, 2021
updated 2.1.4 ← 2.1.2 diff Jan 24, 2021
updated 2.1.2 ← 2.1.1 diff Jul 4, 2020
updated 2.1.1 ← 2.1 diff Jun 3, 2020
updated 2.1 ← 2.0 diff May 28, 2020
updated 2.0 ← 1.3 diff Jan 8, 2020
updated 1.3 ← 1.2.3 diff Oct 26, 2019
updated 1.2.3 ← 1.2.2 diff Jul 10, 2019
updated 1.2.2 ← 1.2.1 diff Feb 11, 2018
updated 1.2.1 ← 1.2 diff Feb 6, 2018
updated 1.2 ← 1.0 diff Jan 12, 2017
new 1.0 Jul 26, 2016