transplantr
Audit and Research Functions for Transplantation
Description
A set of vectorised functions to calculate medical equations used in transplantation, focused mainly on transplantation of abdominal organs. These functions include donor and recipient risk indices as used by NHS Blood & Transplant, OPTN/UNOS and Eurotransplant, tools for quantifying HLA mismatches, functions for calculating estimated glomerular filtration rate (eGFR), a function to calculate the APRI (AST to platelet ratio) score used in initial screening of suitability to receive a transplant from a hepatitis C seropositive donor and some biochemical unit converter functions. All functions are designed to work with either US or international units. References for the equations are provided in the vignettes and function documentation.
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CRAN Check Status
Show all 13 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | OK |
| r-devel-linux-x86_64-debian-gcc | OK |
| r-devel-linux-x86_64-fedora-clang | OK |
| r-devel-linux-x86_64-fedora-gcc | OK |
| r-devel-windows-x86_64 | OK |
| r-oldrel-macos-arm64 | OK |
| r-oldrel-macos-x86_64 | OK |
| r-oldrel-windows-x86_64 | OK |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check History
OK 13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Jun 9, 2026
ERROR 12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Jun 8, 2026
PDF version of manual
Rd conversion errors: Converting parsed Rd's to LaTeX ..Warning in file(out, "wt") : cannot open file '/tmp/RtmpRdePvl/file2ea30f74feee8': No space left on device Warning in file(con, "r") : cannot open file '/tmp/RtmpRdePvl/file2ea30f74feee8': No such file or directory Error in file(con, "r") : cannot open the connection
WARNING 12 OK · 0 NOTE · 1 WARNING · 0 ERROR · 0 FAILURE Jun 7, 2026
Rd files
cannot open the connection cannot open the connection cannot open the connection cannot open the connection cannot open the connection cannot open the connection problems found in ‘meld.Rd’, ‘meld_US.Rd’, ‘meld_na_US.Rd’, ‘mismatches.Rd’, ‘nankivell.Rd’, ‘nankivell_US.Rd’
OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
Code
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