July 2012 in CRAN

Part of Q3 2012 and 2012.

Final

New packages

255

Updated

Archived

+29

Net growth

New packages (49)

GISTools Further Capabilities in Geographic Information Science	2012-07-03
NPHMC Sample Size Calculation for the Proportional Hazards Mixture Cure Model	2012-07-03
teigen Model-Based Clustering and Classification with the Multivariate t Distribution	2012-07-04
PVR Phylogenetic Eigenvectors Regression and Phylogentic Signal-Representation Curve	2012-07-05
RcppCNPy Read-Write Support for 'NumPy' Files via 'Rcpp'	2012-07-05
TPmsm Estimation of Transition Probabilities in Multistate Models	2012-07-05
randomizeBE Create a Random List for Crossover Studies	2012-07-05
astroFns Astronomy: Time and Position Functions, Misc. Utilities	2012-07-06
cosmoFns Cosmological Distances, Times, Luminosities, Etc	2012-07-06
ngspatial Fitting the Centered Autologistic and Sparse Spatial Generalized Linear Mixed Models for Areal Data	2012-07-06
FWDselect Selecting Variables in Regression Models	2012-07-09
SECP Statistical Estimation of Cluster Parameters	2012-07-09
easyanova Analysis of Variance and Other Important Complementary Analyses	2012-07-09
hierNet A Lasso for Hierarchical Interactions	2012-07-10
mvtmeta Multivariate Meta-Analysis	2012-07-10
TrialSize R Functions for Chapter 3,4,6,7,9,10,11,12,14,15 of Sample Size Calculation in Clinical Research	2012-07-11
survIDINRI IDI and NRI for Comparing Competing Risk Prediction Models with Censored Survival Data	2012-07-13
zendeskR Zendesk API Wrapper	2012-07-15
AlleleRetain Allele Retention, Inbreeding, and Demography	2012-07-16
EDISON Network Reconstruction and Changepoint Detection	2012-07-16
cheddar Analysis and Visualisation of Ecological Communities	2012-07-17
fanplot Visualisation of Sequential Probability Distributions Using Fan Charts	2012-07-17
frontiles Partial Frontier Efficiency Analysis	2012-07-17
CBPS Covariate Balancing Propensity Score	2012-07-19
pln Polytomous Logit-Normit (Graded Logistic) Model Estimation	2012-07-19
FRACTION Numeric Number into Fraction	2012-07-20
HGNChelper Identify and Correct Invalid HGNC Human Gene Symbols and MGI Mouse Gene Symbols	2012-07-20
oro.pet Rigorous - Positron Emission Tomography	2012-07-20
HydroMe Estimating Water Retention and Infiltration Model Parameters using Experimental Data	2012-07-23
binhf Haar-Fisz Functions for Binomial Data	2012-07-23
mcclust Process an MCMC Sample of Clusterings	2012-07-23
mcr Method Comparison Regression	2012-07-24
phonTools Tools for Phonetic and Acoustic Analyses	2012-07-24
rrcovHD Robust Multivariate Methods for High Dimensional Data	2012-07-24
sig Print Function Signatures	2012-07-25
FHtest Tests for Right and Interval-Censored Survival Data Based on the Fleming-Harrington Class	2012-07-26
OPI Open Perimetry Interface	2012-07-26
PlayerRatings Dynamic Updating Methods for Player Ratings Estimation	2012-07-26
bReeze Functions for Wind Resource Assessment	2012-07-26
mmeta Multivariate Meta-Analysis	2012-07-26
PVAClone Population Viability Analysis with Data Cloning	2012-07-27
R0 Estimation of R0 and Real-Time Reproduction Number from Epidemics	2012-07-27
genSurv Generating Multi-State Survival Data	2012-07-27
RAppArmor Bindings to AppArmor and Security Related Linux Tools	2012-07-28
metRology Support for Metrological Applications	2012-07-29
npmv Nonparametric Comparison of Multivariate Samples	2012-07-29
poisson.glm.mix Fit High Dimensional Mixtures of Poisson GLMs	2012-07-29
MPDiR Data Sets and Scripts for Modeling Psychophysical Data in R	2012-07-30
dsample Discretization-Based Direct Random Sample Generation	2012-07-30

Archived / removed

Why

11 reason not recorded
2 the original maintainer, 'Lixin Gong <lgong@tibco.com>', is uncontactable. Archived on 2012-09-21 as 'msProcess' was
1 : it had check ERRORs since R-2.15.0 (at least) and was not fixed for weeks even after reminders
1 ; it depends on the archived 'papply' package
1 ; it depends on the archived 'richards' package
1 the original maintainer, 'Lixin Gong <lgong@tibco.com>', is uncontactable. Archived on 2012-09-21 as one of its dependencies was unavailable
1 the original maintainer, 'Lixin Gong <lgong@tibco.com>', is uncontactable. Archived on 2012-10-12 as nothing depends on it any more
1 the original maintainer, 'Romain Francois <francoisromain@free.fr>', is unresponsive

msBreast the original maintainer, 'Lixin Gong <lgong@tibco.com>', is uncontactable. Archived on 2012-09-21 as 'msProcess' was	2012-07-25
msDilution the original maintainer, 'Lixin Gong <lgong@tibco.com>', is uncontactable. Archived on 2012-09-21 as 'msProcess' was	2012-07-25
msProcess the original maintainer, 'Lixin Gong <lgong@tibco.com>', is uncontactable. Archived on 2012-09-21 as one of its dependencies was unavailable	2012-07-25
msProstate the original maintainer, 'Lixin Gong <lgong@tibco.com>', is uncontactable. Archived on 2012-10-12 as nothing depends on it any more	2012-07-25
COZIGAM	2012-07-23
MISA	2012-07-23
MeDiChI	2012-07-23
NetworkAnalysis	2012-07-23
crosshybDetector	2012-07-23
integrativeME	2012-07-23
two.stage.boot	2012-07-23
ant the original maintainer, 'Romain Francois <francoisromain@free.fr>', is unresponsive	2012-07-18
int64 the original maintainer, 'Romain Francois <romain@r-enthusiasts.com>', is unresponsive. Archived 2013-12-09	2012-07-18
sudokuplus	2012-07-10
emu	2012-07-09
emudata	2012-07-09
anm	2012-07-03
IQMNMR ; it depends on the archived 'papply' package	2012-07-01
richards : it had check ERRORs since R-2.15.0 (at least) and was not fixed for weeks even after reminders	2012-07-01
similarityRichards ; it depends on the archived 'richards' package	2012-07-01

Notable

Major version jumps

JM 0.9-3→1.0-0 bnlearn 2.9→3.0 setwidth 0.9-4→1.0-0 GPvam 1.1-0→2.0-0 selectiongain 1.2.1.0→2.0.1 MARSS 2.9→3.1 SpatialEpi 0.1→1.0 comparison 0.4-0→1.0-0 statnet 2.6→3.0-1 wfe 0.1→1.0 grpreg 1.2-2→2.0-0 LogicForest 1.0→2.0.0 SGPdata 1.0-0.0→2.0-0.0 rainbow 2.9→3.0 Rquake 1.6-3→2.0-1

First-time CRAN authors

Hongyan Chen Binbin Lu ×2 Carl Rogers Andrew Harris Emmanuel Arnhold Nora M. Villanueva ×4 Marta Sestelo ×6 Frank Dondelinger ×3 Sophie Lebre Guy J. Abel ×4 Abdelaati Daouia Thibault Laurent Christian Fong Inbeom Lee Sida Peng ×2 Marc Ratkovic ×2 Xiaolin Yang Ayush Aggarwal Sehyun Oh Markus Riester