HGNChelper
Identify and Correct Invalid HGNC Human Gene Symbols and MGI Mouse Gene Symbols
Description
Contains functions for identifying and correcting HGNC human gene symbols and MGI mouse gene symbols which have been converted to date format by Excel, withdrawn, or aliased. Also contains functions for reversibly converting between HGNC symbols and valid R names.
Downloads
4.6K
Last 30 days
1718th
8.7K
Last 90 days
33.6K
Last year
Trend: +120.9% (30d vs prior 30d)
5
Last 30 days
66
Last 90 days
255
Last year
Trend: -75% (30d vs prior 30d)
3
Last 7 days
17
Last 30 days
1
All-time
autoCRAN-only: this name is served only by autoCRAN, so the count is exact.
CRAN Check Status
Show all 13 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | OK |
| r-devel-linux-x86_64-debian-gcc | OK |
| r-devel-linux-x86_64-fedora-clang | OK |
| r-devel-linux-x86_64-fedora-gcc | OK |
| r-devel-windows-x86_64 | OK |
| r-oldrel-macos-arm64 | OK |
| r-oldrel-macos-x86_64 | OK |
| r-oldrel-windows-x86_64 | OK |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check History
OK 12 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Apr 25, 2026
NOTE 12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
installed package size
installed size is 5.2Mb
sub-directories of 1Mb or more:
data 4.8Mb
installed package size
installed size is 5.2Mb
sub-directories of 1Mb or more:
data 4.8Mb
Code
Structure
Lines of code
1,144
Files
39
Compiled share
0%
Has compiled src
No
Language breakdown
API
Exported functions
8
Internal functions
1
Recent export changes
Testing & CI
Has tests
Yes
Test-to-code ratio
0.31
testthat edition
–
CI present
No
CI type
[]
PR gated
No
Docs
Return-value doc rate
100%
\dontrun example ratio
20%
Roxygen coverage
100%
Has pkgdown
No
NEWS present
Yes
Health & Security signals
Informational signals; not verdicts.
on.exit coverage
0%
Unsafe pattern score
0
Dep constraint coverage
0%
Secret pattern count
0
Bundled 3rd-party code
2 items
Portability & License
Min R version
4.1.0
System requirements
–
C++ standard
–
License
GPL (>= 2.0)
License flags
not SPDX, not OSI
History
Versions
15
First release
2012-01-01
Latest release
2024-11-16
Avg cadence
236 days
Cold removal rate
100%
Dep drift
3
LOC over versions
Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/cran-code-metrics.