Q3 2012 in CRAN

Final

Part of 2012.

120

New packages

682

Updated

Archived

+120

Net growth

New packages (60+)

GISTools Further Capabilities in Geographic Information Science	2012-07-03
NPHMC Sample Size Calculation for the Proportional Hazards Mixture Cure Model	2012-07-03
teigen Model-Based Clustering and Classification with the Multivariate t Distribution	2012-07-04
PVR Phylogenetic Eigenvectors Regression and Phylogentic Signal-Representation Curve	2012-07-05
RcppCNPy Read-Write Support for 'NumPy' Files via 'Rcpp'	2012-07-05
TPmsm Estimation of Transition Probabilities in Multistate Models	2012-07-05
randomizeBE Create a Random List for Crossover Studies	2012-07-05
astroFns Astronomy: Time and Position Functions, Misc. Utilities	2012-07-06
cosmoFns Cosmological Distances, Times, Luminosities, Etc	2012-07-06
ngspatial Fitting the Centered Autologistic and Sparse Spatial Generalized Linear Mixed Models for Areal Data	2012-07-06
FWDselect Selecting Variables in Regression Models	2012-07-09
SECP Statistical Estimation of Cluster Parameters	2012-07-09
easyanova Analysis of Variance and Other Important Complementary Analyses	2012-07-09
hierNet A Lasso for Hierarchical Interactions	2012-07-10
mvtmeta Multivariate Meta-Analysis	2012-07-10
TrialSize R Functions for Chapter 3,4,6,7,9,10,11,12,14,15 of Sample Size Calculation in Clinical Research	2012-07-11
survIDINRI IDI and NRI for Comparing Competing Risk Prediction Models with Censored Survival Data	2012-07-13
zendeskR Zendesk API Wrapper	2012-07-15
AlleleRetain Allele Retention, Inbreeding, and Demography	2012-07-16
EDISON Network Reconstruction and Changepoint Detection	2012-07-16
cheddar Analysis and Visualisation of Ecological Communities	2012-07-17
fanplot Visualisation of Sequential Probability Distributions Using Fan Charts	2012-07-17
frontiles Partial Frontier Efficiency Analysis	2012-07-17
CBPS Covariate Balancing Propensity Score	2012-07-19
pln Polytomous Logit-Normit (Graded Logistic) Model Estimation	2012-07-19
FRACTION Numeric Number into Fraction	2012-07-20
HGNChelper Identify and Correct Invalid HGNC Human Gene Symbols and MGI Mouse Gene Symbols	2012-07-20
oro.pet Rigorous - Positron Emission Tomography	2012-07-20
HydroMe Estimating Water Retention and Infiltration Model Parameters using Experimental Data	2012-07-23
binhf Haar-Fisz Functions for Binomial Data	2012-07-23
mcclust Process an MCMC Sample of Clusterings	2012-07-23
mcr Method Comparison Regression	2012-07-24
phonTools Tools for Phonetic and Acoustic Analyses	2012-07-24
rrcovHD Robust Multivariate Methods for High Dimensional Data	2012-07-24
sig Print Function Signatures	2012-07-25
FHtest Tests for Right and Interval-Censored Survival Data Based on the Fleming-Harrington Class	2012-07-26
OPI Open Perimetry Interface	2012-07-26
PlayerRatings Dynamic Updating Methods for Player Ratings Estimation	2012-07-26
bReeze Functions for Wind Resource Assessment	2012-07-26
mmeta Multivariate Meta-Analysis	2012-07-26
PVAClone Population Viability Analysis with Data Cloning	2012-07-27
R0 Estimation of R0 and Real-Time Reproduction Number from Epidemics	2012-07-27
genSurv Generating Multi-State Survival Data	2012-07-27
RAppArmor Bindings to AppArmor and Security Related Linux Tools	2012-07-28
metRology Support for Metrological Applications	2012-07-29
npmv Nonparametric Comparison of Multivariate Samples	2012-07-29
poisson.glm.mix Fit High Dimensional Mixtures of Poisson GLMs	2012-07-29
MPDiR Data Sets and Scripts for Modeling Psychophysical Data in R	2012-07-30
dsample Discretization-Based Direct Random Sample Generation	2012-07-30
catIrt Simulate IRT-Based Computerized Adaptive Tests	2012-08-01
dgof Discrete Goodness-of-Fit Tests	2012-08-04
tiff Read and Write TIFF Images	2012-08-05
Kpart Cubic Spline Fitting with Knot Selection	2012-08-06
rpf Response Probability Functions	2012-08-06
ds Descriptive Statistics	2012-08-07
weathermetrics Functions to Convert Between Weather Metrics	2012-08-07
CGP Composite Gaussian Process Models	2012-08-08
aftgee Accelerated Failure Time Model with Generalized Estimating Equations	2012-08-08
GPfit Gaussian Processes Modeling	2012-08-09
afex Analysis of Factorial Experiments	2012-08-09

Notable

Major version jumps

JM 0.9-3→1.0-0 bnlearn 2.9→3.0 setwidth 0.9-4→1.0-0 GPvam 1.1-0→2.0-0 selectiongain 1.2.1.0→2.0.1 MARSS 2.9→3.1 SpatialEpi 0.1→1.0 comparison 0.4-0→1.0-0 statnet 2.6→3.0-1 wfe 0.1→1.0 grpreg 1.2-2→2.0-0 LogicForest 1.0→2.0.0 SGPdata 1.0-0.0→2.0-0.0 rainbow 2.9→3.0 Rquake 1.6-3→2.0-1 mcmcse 0.1→1.0-1 ez 3.0-1→4.0-2 kequate 0.5.1→1.0.0 heplots 0.9-12→1.0-0 mclust 3.5→4.0

First-time CRAN authors

Hongyan Chen Binbin Lu ×2 Carl Rogers Andrew Harris Emmanuel Arnhold Nora M. Villanueva ×4 Marta Sestelo ×6 Frank Dondelinger ×3 Sophie Lebre Guy J. Abel ×4 Abdelaati Daouia Thibault Laurent Christian Fong Inbeom Lee Sida Peng ×2 Marc Ratkovic ×2 Xiaolin Yang Ayush Aggarwal Sehyun Oh Markus Riester