R Observatory: Metrics for msProcess version 1.0.7

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

This package was removed from CRAN on 2012-07-25. Its history is shown below.

Reason: the original maintainer, 'Lixin Gong <lgong@tibco.com>', is uncontactable. Archived on 2012-09-21 as one of its dependencies was unavailable

Details below reflect version 1.0.7, its last release before removal.

msProcess

1.0.7

Protein Mass Spectra Processing

0packages depend

–downloads / year

–test coverage

–checks pass

Overview

About

Maintained by ORPHANED6 releasesCRAN page ↗

This package provides tools for protein mass spectra processing including data preparation, denoising, noise estimation, baseline correction, intensity normalization, peak detection, peak alignment, peak quantification, and various functionalities for data ingestion/conversion, mass calibration, data quality assessment, and protein mass spectra simulation. It also provides auxiliary tools for data representation, data visualization, and pipeline processing history recording and retrieval.

Install

R (source archive)

url <- "https://cran.r-project.org/src/contrib/Archive/msProcess/msProcess_1.0.7.tar.gz"
pkgFile <- "msProcess_1.0.7.tar.gz"
download.file(url, pkgFile)
install.packages(pkgFile, type = "source", repos = NULL)

This package is no longer on CRAN, so install.packages() cannot fetch it by name. This downloads the last archived source (1.0.7) and builds it locally. Install its dependencies first, and note that building from source needs the usual compiler toolchain.

Health

CRAN checks

CRAN check results are not tracked yet.

Code health

None

Tests · ratio 0.00

not tracked

Coverage

7

Dependencies · direct

Documentation

READMENoVignettesNopkgdown siteNoNEWSNoCode of conductNoContributing guideNo

Examples that run: 96%
Documented parameters: not tracked
Return-value docs: not tracked
References docs: 35%

Downloads

msProcess Releases R versions

Daily download trend is not available in this view yet.

Compare downloads with other packages →

Also on22 c2d4u

Dependencies

Declared dependencies

4 external dependencies (excludes base and recommended)

Depends (7)

R >= 2.14.0methodsgraphicswmtsa robust XMLstats

Imports (1)

splus2R

LinkingTo (0)

none

Suggests (0)

none

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

–indirect (not tracked)

Nothing depends on this yet.

Code & Tests

People & History

People (3)

Other (3)

Lixin Gong

Contributor

William Constantine

Contributor

and Yu Alex Chen

Contributor · added in 1.0.5

Listed in earlier versions (1)

and Alex Chen

no longer listed · 1.0.2 to 1.0.4

Package Timeline

6 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 3.0.0 released · 2013-04-03
orphanedOrphaned by its maintainer
2012-07-25
the original maintainer, 'Lixin Gong <lgong@tibco.com>', is uncontactable. Archived on 2012-09-21 as one of its dependencies was unavailable
R
R 2.15.0 released · 2012-03-30
R
R 2.14.0 released · 2011-10-31
R
R 2.13.0 released · 2011-04-13
1.0.7
2011-02-07 · diff ↗
1.0.6
2011-02-07 · diff ↗
R
R 2.12.0 released · 2010-10-15
R
R 2.11.0 released · 2010-04-22
R
R 2.10.0 released · 2009-10-26
R
R 2.9.0 released · 2009-04-17
1.0.5
2009-01-20 · diff ↗
R
R 2.8.0 released · 2008-10-20
1.0.4
2008-08-29 · diff ↗
1.0.3
2008-05-29 · diff ↗
1.0.2
2008-05-01

Show 1 earlier events

R
R 2.7.0 released · 2008-04-22

Package metadata

Total releases: 6
License: GPL-2 OSI
Minimum R: ≥ 2.14.0
Bundled data: 465 KB / 2 files
Download size: not tracked yet
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("msProcess")

Format

Gong, L., Constantine, W., & Chen, a. Y. A. (n.d.). msProcess: Protein Mass Spectra Processing (Version 1.0.7) [Computer software]. Retrieved August 13, 2026, from https://CRAN.R-project.org/package=msProcess

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for msProcess version 1.0.7 [Data set]. HJJB, LLC. Data release v2026-08-13. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-13, which the citation names so these numbers can be found later. More on citing and the projects behind them.

Report a problem with this page →