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webbioc

Bioc current

Bioconductor Web Interface

v1.84.0 · software · GPL (>= 2)

Release Lineage

Entered 1.4 · May 17, 2004

Current · Requires R 4.6

1.0 In 45 of 49 releases 3.23

Description

An integrated web interface for doing microarray analysis using several of the Bioconductor packages. It is intended to be deployed as a centralized bioinformatics resource for use by many users. (Currently only Affymetrix oligonucleotide analysis is supported.)

Test coverage

Line coverage

Expression

Tests / Examples

Functions

2 2 exported

Complexity

17.5 avg / 33 max

Call network

2 nodes / 0 edges

Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.

Loading call graph…

Lowest coverage

Per-function coverage is not measured for this package yet.

Code

Structure

Lines of code

742

Files

24

Compiled share

0%

Has compiled src

No

Language breakdown

R 100 (13.5%)Docs 112 (15.1%)Vignettes 530 (71.4%)

API

Exported functions

2

Internal functions

0

Testing & CI

Has tests

No

Test-to-code ratio

0.00

testthat edition

CI present

No

CI type

[]

PR gated

No

Docs

Roxygen coverage

100%

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

0%

Unsafe pattern score

0

Dep constraint coverage

0%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

1.8.0

System requirements

3

C++ standard

License

GPL (>= 2)

License flags

SPDX valid, OSI approved

History

Versions

45

First release

2004-08-23

Latest release

2026-04-28

Avg cadence

182 days

Cold removal rate

Dep drift

7

LOC over versions

v1.4: 464 LOCv1.5: 464 LOCv1.6: 464 LOCv1.7: 464 LOCv1.8: 464 LOCv1.9: 211 LOCv2.0: 211 LOCv2.1: 211 LOCv2.2: 211 LOCv2.3: 211 LOCv2.4: 211 LOCv2.5: 213 LOCv2.6: 213 LOCv2.7: 211 LOCv2.8: 211 LOCv2.9: 211 LOCv2.10: 211 LOCv2.11: 212 LOCv2.12: 212 LOCv2.13: 212 LOCv2.14: 742 LOCv3.0: 742 LOCv3.1: 742 LOCv3.2: 742 LOCv3.3: 742 LOCv3.4: 742 LOCv3.5: 742 LOCv3.6: 742 LOCv3.7: 742 LOCv3.8: 742 LOCv3.9: 742 LOCv3.10: 742 LOCv3.11: 742 LOCv3.12: 742 LOCv3.13: 742 LOCv3.14: 742 LOCv3.15: 742 LOCv3.16: 742 LOCv3.17: 742 LOCv3.18: 742 LOCv3.19: 742 LOCv3.20: 742 LOCv3.21: 742 LOCv3.22: 742 LOCv3.23: 742 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.

Documentation

Documentation
READMENoVignettesYes · dynamicpkgdown siteNoNEWSNoCode of conductNoContributing guideNo
Examples that run
not tracked
Documented parameters
100%
Return-value docs
50%
References docs
0%

Topics

People

Colin A. Smith

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("webbioc")

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

APA

Balamuta, J. J. (2026). R Observatory: Metrics for webbioc version 1.84.0 [Data set]. HJJB, LLC. Data release v2026-08-24. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-24, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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