cytolib
Bioc currentC++ infrastructure for representing and interacting with the gated cytometry data
Release Lineage
Entered 3.6 · Oct 31, 2017
Current · Requires R 4.6
Description
This package provides the core data structure and API to represent and interact with the gated cytometry data.
None published for Bioconductor
Test coverage
Line coverage
–
Expression
–
Tests / Examples
–
Functions
666 1 exported
Complexity
2 avg / 3 max
Call network
666 nodes / 388 edges
Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.
Call graph
Open call graph →Lowest coverage
Per-function coverage is not measured for this package yet.
Code
Structure
Lines of code
19,397
Files
1,260
Compiled share
99.5%
Has compiled src
Yes
Language breakdown
API
Exported functions
1
Internal functions
2
Recent export changes
Testing
Has tests
No
Test-to-code ratio
0.00
testthat edition
–
Docs
Roxygen coverage
100%
Health & Security signals
Informational signals; not verdicts.
on.exit coverage
0%
Unsafe pattern score
0
Dep constraint coverage
0%
Secret pattern count
0
Bundled 3rd-party code
2 items
Portability & License
Min R version
3.4
System requirements
2 externalGNU make, C++11
C++ standard
C++11
License
AGPL-3.0-only
License flags
not SPDX, not OSI
History
Versions
18
First release
2017-11-03
Latest release
2026-04-28
Avg cadence
181 days
Cold removal rate
100%
Dep drift
3
LOC over versions
Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.
Documentation
- Help pages
- 1
- Examples that run
- no examples
- Exported functions with examples
- 0%
- Documented parameters
- not tracked
- Return-value docs
- 0%
- Help pages citing references
- 0%
- Using cytolib HTML
Repository practices
Checks read the Bioconductor git repository (git.bioconductor.org), branch RELEASE_3_23.
3 practices detected in the Bioconductor git repository
Topics
Depended on by (3)
Bioconductor (3)
People (from the free-text Author field)
Cite
Cite this package
Run in R for the authors' preferred citation:
citation("cytolib")Cite the R Observatory
For a number measured here: a download total, a coverage figure, an archival date.
From data release v2026-10-24, which the citation names so these numbers can be found later. More on citing and the projects behind them.