codelink
Bioc currentManipulation of Codelink microarray data
Release Lineage
Entered 1.8 · Apr 27, 2006
Current · Requires R 4.6
Description
This package facilitates reading, preprocessing and manipulating Codelink microarray data. The raw data must be exported as text file using the Codelink software.
Test coverage
Line coverage
–
Expression
–
Tests / Examples
–
Functions
35 18 exported
Complexity
8.5 avg / 57 max
Call network
35 nodes / 15 edges
Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.
Call graph
Open call graph →Lowest coverage
Per-function coverage is not measured for this package yet.
Code
Structure
Lines of code
4,590
Files
59
Compiled share
0%
Has compiled src
No
Language breakdown
API
Exported functions
20
Internal functions
17
Testing & CI
Has tests
No
Test-to-code ratio
0.00
testthat edition
–
CI present
No
CI type
[]
PR gated
No
Docs
Roxygen coverage
100%
Health & Security signals
Informational signals; not verdicts.
on.exit coverage
100%
Unsafe pattern score
0
Dep constraint coverage
40%
Secret pattern count
0
Bundled 3rd-party code
2 items
Portability & License
Min R version
2.10
System requirements
–
C++ standard
–
License
GPL-2
License flags
SPDX valid, OSI approved
History
Versions
41
First release
2006-04-25
Latest release
2026-04-28
Avg cadence
182 days
Cold removal rate
100%
Dep drift
7
LOC over versions
Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.
Documentation
- Examples that run
- 14%
- Documented parameters
- 99%
- Return-value docs
- 47%
- References docs
- 0%
Topics
Depended on by (2)
Bioconductor (2)
People
Diego Diez
Cite
Cite this package
Run in R for the authors' preferred citation:
citation("codelink")Cite the R Observatory
For a number measured here: a download total, a coverage figure, an archival date.
From data release v2026-08-23, which the citation names so these numbers can be found later. More on citing and the projects behind them.