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TENxPBMCData

Bioc current

PBMC data from 10X Genomics

v1.30.0 · Package record · experiment · CC BY 4.0

Release Lineage

Entered 3.8 · Oct 31, 2018

Current · Requires R 4.6

1.0 In 16 of 49 releases 3.23

Description

Single-cell RNA-seq data for on PBMC cells, generated by 10X Genomics.

Advisories

None published for Bioconductor

Test coverage

Line coverage

–

Expression

–

Tests / Examples

–

Functions

1 1 exported

Complexity

2 avg / 2 max

Call network

1 nodes / 0 edges

Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.

Loading call graph…

Lowest coverage

Per-function coverage is not measured for this package yet.

Code

Structure

Lines of code

287

Files

8

Compiled share

0%

Has compiled src

No

Language breakdown

R 43 (15%)Docs 77 (26.8%)Vignettes 167 (58.2%)

API

Exported functions

1

Internal functions

0

Recent export changes

v3.8+1 TENxPBMCData

Testing

Has tests

No

Test-to-code ratio

0.00

testthat edition

–

Docs

Roxygen coverage

100%

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

–

Unsafe pattern score

0

Dep constraint coverage

0%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

–

System requirements

–

C++ standard

–

License

CC BY 4.0

License flags

SPDX valid, not OSI

History

Versions

16

First release

2018-10-30

Latest release

2026-04-28

Avg cadence

182 days

Cold removal rate

–

Dep drift

0

LOC over versions

v3.8: 247 LOCv3.9: 247 LOCv3.10: 247 LOCv3.11: 247 LOCv3.12: 247 LOCv3.13: 287 LOCv3.14: 287 LOCv3.15: 287 LOCv3.16: 287 LOCv3.17: 287 LOCv3.18: 287 LOCv3.19: 287 LOCv3.20: 287 LOCv3.21: 287 LOCv3.22: 287 LOCv3.23: 287 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.

Documentation

In the Bioconductor 3.23 release
READMENoVignettesYes · 1 · dynamicNEWSNoCitation fileNoWebsitenot declared in DESCRIPTION
Help pages
1
Examples that run
100%1 run in a plain check
Exported functions with examples
100%
Documented parameters
50%
Return-value docs
100%
Help pages citing references
100%

Repository practices

Bioconductor git repository

Checks read the Bioconductor git repository (git.bioconductor.org), branch RELEASE_3_23.

No development-tooling practices detected in the Bioconductor git repository.

Datasets

Bundled datasets · 1
NameClassSizeAlso in
metadatadata.frame30 × 16No other package

All of TENxPBMCData's data objects

Topics

Maintainer
Stephanie Hicks

Available on

CRANr2uBioconductorautoCRANCOPR

Depended on by (4)

Show all 23 packagesHide all 23 packages

People

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("TENxPBMCData")
Hicks, S., Gilis, J., Hansen, K. D., Killian, T., Kose, M. C., Machlab, D., Malfait, M., Risso, D., Tang, C., & van den Brand, T. (2026). TENxPBMCData: PBMC data from 10X Genomics (Version 1.30.0) [Computer software]. https://bioconductor.org/packages/TENxPBMCData

This package has no citation file, so citation() returns this entry built from DESCRIPTION.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

APA

Balamuta, J. J. (2026). R Observatory: Metrics for TENxPBMCData version 1.30.0 [Data set]. HJJB, LLC. Data release v2026-10-25. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-25, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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