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RBGL

Bioc current

An interface to the BOOST graph library

v1.88.0 · software · Artistic-2.0
View on Bioconductor ↗ Source ↗

Release Lineage

Entered 1.4 · May 17, 2004

Current · Requires R 4.6

1.0 In 45 of 49 releases 3.23

Description

A fairly extensive and comprehensive interface to the graph algorithms contained in the BOOST library.

Test coverage

Line coverage

–

Expression

–

Tests / Examples

–

Functions

215 75 exported

Complexity

2.8 avg / 12 max

Call network

215 nodes / 83 edges

Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.

Call graph

Open call graph →
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Lowest coverage

Per-function coverage is not measured for this package yet.

Code

Structure

Lines of code

12,042

Files

146

Compiled share

47.3%

Has compiled src

Yes

Language breakdown

R 1,532 (12.7%)C/C++/src 5,693 (47.3%)Tests 1 (0%)Docs 3,328 (27.6%)Vignettes 1,488 (12.4%)

API

Exported functions

75

Internal functions

2

Testing & CI

Has tests

Yes

Test-to-code ratio

0.00

testthat edition

–

CI present

No

CI type

[]

PR gated

No

Docs

Roxygen coverage

100%

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

–

Unsafe pattern score

0

Dep constraint coverage

0%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

–

System requirements

–

C++ standard

–

License

Artistic-2.0

License flags

SPDX valid, OSI approved

History

Versions

45

First release

2004-08-23

Latest release

2026-04-28

Avg cadence

182 days

Cold removal rate

100%

Dep drift

1

LOC over versions

v1.4: 1,134 LOCv1.5: 1,560 LOCv1.6: 3,608 LOCv1.7: 4,282 LOCv1.8: 5,732 LOCv1.9: 6,661 LOCv2.0: 6,757 LOCv2.1: 7,263 LOCv2.2: 7,926 LOCv2.3: 8,544 LOCv2.4: 8,546 LOCv2.5: 10,352 LOCv2.6: 10,352 LOCv2.7: 10,352 LOCv2.8: 10,352 LOCv2.9: 10,352 LOCv2.10: 10,269 LOCv2.11: 10,415 LOCv2.12: 10,415 LOCv2.13: 10,415 LOCv2.14: 12,172 LOCv3.0: 12,173 LOCv3.1: 12,173 LOCv3.2: 12,172 LOCv3.3: 12,172 LOCv3.4: 12,170 LOCv3.5: 12,170 LOCv3.6: 12,170 LOCv3.7: 12,254 LOCv3.8: 12,104 LOCv3.9: 12,302 LOCv3.10: 12,302 LOCv3.11: 12,302 LOCv3.12: 12,302 LOCv3.13: 12,302 LOCv3.14: 12,302 LOCv3.15: 12,302 LOCv3.16: 12,302 LOCv3.17: 12,038 LOCv3.18: 12,042 LOCv3.19: 12,042 LOCv3.20: 12,042 LOCv3.21: 12,042 LOCv3.22: 12,042 LOCv3.23: 12,042 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.

Documentation

Documentation
READMENoVignettesYes · dynamicpkgdown siteNoNEWSYes · 0% structuredCode of conductNoContributing guideNo
Examples that run
98%
Documented parameters
99%
Return-value docs
100%
References docs
95%

Topics

Software › StatisticalMethod › GraphAndNetwork
Software › WorkflowStep › Visualization › Network

Depended on by (61)

Bioconductor (47)

apComplex BiocPkgTools biocViews BioNet CAMERA Category CellNOptR ChIPpeakAnno CHRONOS CytoML DEGraph DEsubs EventPointer fgga flowWorkspace G4SNVHunter GeneNetworkBuilder GenomicInteractionNodes GOstats graph gwascat KEGGgraph keggorthology NCIgraph ontoProc openCyto OrganismDbi rBiopaxParser VariantFiltering VariantTools +17 more

CRAN (14)

PerfMeas BiDAG RANKS SEMgraph SID clustNet eff2 micd pcalg rags2ridges PFCI archeofrag archeofrag.gui maGUI

People

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