CHRONOS
Bioc currentCHRONOS: A time-varying method for microRNA-mediated sub-pathway enrichment analysis
Release Lineage
Entered 3.3 · May 4, 2016
Current · Requires R 4.6
Description
A package used for efficient unraveling of the inherent dynamic properties of pathways. MicroRNA-mediated subpathway topologies are extracted and evaluated by exploiting the temporal transition and the fold change activity of the linked genes/microRNAs.
Test coverage
Line coverage
–
Expression
–
Tests / Examples
–
Functions
107 0 exported
Complexity
7.2 avg / 33 max
Call network
107 nodes / 142 edges
Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.
Call graph
Open call graph →Lowest coverage
Per-function coverage is not measured for this package yet.
Code
Structure
Lines of code
7,023
Files
73
Compiled share
0%
Has compiled src
No
Language breakdown
API
Exported functions
16
Internal functions
107
Testing & CI
Has tests
Yes
Test-to-code ratio
0.00
testthat edition
–
CI present
No
CI type
[]
PR gated
No
Docs
Roxygen coverage
0%
Health & Security signals
Informational signals; not verdicts.
on.exit coverage
0%
Unsafe pattern score
0
Dep constraint coverage
0%
Secret pattern count
0
Bundled 3rd-party code
2 items
Portability & License
Min R version
3.5
System requirements
2
C++ standard
–
License
GPL-2
License flags
SPDX valid, OSI approved
History
Versions
21
First release
2016-05-15
Latest release
2026-04-28
Avg cadence
182 days
Cold removal rate
–
Dep drift
3
LOC over versions
Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.
Documentation
- Examples that run
- 100%
- Documented parameters
- not tracked
- Return-value docs
- not tracked
- References docs
- 31%
Topics
People
Panos Balomenos