AnVILAz
Bioc currentR / Bioconductor Support for the AnVIL Azure Platform
Release Lineage
Entered 3.20 · Oct 30, 2024
Current · Requires R 4.6
Description
The AnVIL is a cloud computing resource developed in part by the National Human Genome Research Institute. The AnVILAz package supports end-users and developers using the AnVIL platform in the Azure cloud. The package provides a programmatic interface to AnVIL resources, including workspaces, notebooks, tables, and workflows. The package also provides utilities for managing resources, including copying files to and from Azure Blob Storage, and creating shared access signatures (SAS) for secure access to Azure resources.
None published for Bioconductor
Test coverage
Line coverage
–
Expression
–
Tests / Examples
–
Functions
47 11 exported
Complexity
1.9 avg / 9 max
Call network
47 nodes / 47 edges
Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.
Call graph
Open call graph →Lowest coverage
Per-function coverage is not measured for this package yet.
Code
Structure
Lines of code
3,046
Files
45
Compiled share
0%
Has compiled src
No
Language breakdown
API
Exported functions
11
Internal functions
32
Recent export changes
Testing
Has tests
Yes
Test-to-code ratio
0.00
testthat edition
–
Docs
Roxygen coverage
100%
Health & Security signals
Informational signals; not verdicts.
on.exit coverage
100%
Unsafe pattern score
0
Dep constraint coverage
0%
Secret pattern count
0
Bundled 3rd-party code
2 items
Portability & License
Min R version
4.5.0
System requirements
2 externalaz, azcopy
C++ standard
–
License
Artistic-2.0
License flags
SPDX valid, OSI approved
History
Versions
4
First release
2024-10-29
Latest release
2026-04-28
Avg cadence
181 days
Cold removal rate
–
Dep drift
0
LOC over versions
Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.
Documentation
- Help pages
- 14 (4 internal)includes a package overview page
- Examples that run
- 100%11 run in a plain check (6 of them under a condition)
- Exported functions with examples
- 100%
- Documented parameters
- 100%
- Return-value docs
- 80%
- Help pages citing references
- 0%
Bug fixes and minor improvements
- Sanitize error messages in
.az_do()to prevent sensitive information in URLs. - Added unit tests for utility functions.
From NEWS.md in the release
Repository practices
Checks run against github.com/bioconductor/anvilaz on 2026-10-22.
No development-tooling practices detected in the upstream repository.
Topics
Suggested by (2)
People
- Marcel Ramos author maintainer
- Martin Morgan author contributor
Cite
Cite this package
Run in R for the authors' preferred citation:
citation("AnVILAz")This package has no citation file, so citation() returns this entry built from DESCRIPTION.
Cite the R Observatory
For a number measured here: a download total, a coverage figure, an archival date.
From data release v2026-10-23, which the citation names so these numbers can be found later. More on citing and the projects behind them.