Packages
22 packages on Bioconductor tagged RNASeq or Software, most distinct IPs first
| Package | Maintainer | Category | Latest version | Distinct IPs a month | Needs |
|---|---|---|---|---|---|
| QFeatures Quantitative features for mass spectrometry dataLaurent Gatto | Laurent Gatto | software | 28 Apr 2026 | 4,540 | 99 |
| quantiseqr Quantification of the Tumor Immune contexture from RNA-seq dataFederico Marini | Federico Marini | software | 28 Apr 2026 | 1,727 | 58 |
| QuasR Quantify and Annotate Short Reads in RMichael Stadler | Michael Stadler | software | 28 Apr 2026 | 1,551 | 114 |
| qpgraph Estimation of Genetic and Molecular Regulatory Networks from High-Throughput Genomics DataRobert Castelo | Robert Castelo | software | 28 Apr 2026 | 1,495 | 81 |
| qusage qusage: Quantitative Set Analysis for Gene ExpressionChristopher Bolen | Christopher Bolen | software | 28 Apr 2026 | 1,476 | 19 |
| quantsmooth Quantile smoothing and genomic visualization of array dataJan Oosting | Jan Oosting | software | 28 Apr 2026 | 1,330 | 14 |
| QDNAseq Quantitative DNA Sequencing for Chromosomal AberrationsDaoud Sie | Daoud Sie | software | 28 Apr 2026 | 1,288 | 48 |
| quantro A test for when to use quantile normalizationStephanie Hicks | Stephanie Hicks | software | 28 Apr 2026 | 1,244 | 153 |
| qcmetrics A Framework for Quality ControlLaurent Gatto | Laurent Gatto | software | 28 Apr 2026 | 1,190 | 20 |
| qsea IP-seq data analysis and vizualizationMatthias Lienhard | Matthias Lienhard | software | 28 Apr 2026 | 950 | 64 |
| qpcrNorm Data-driven normalization strategies for high-throughput qPCR data.Jessica Mar | Jessica Mar | software | 28 Apr 2026 | 912 | 14 |
| qPLEXanalyzer Tools for quantitative proteomics data analysisAshley Sawle | Ashley Sawle | software | 28 Apr 2026 | 893 | 148 |
| QSutils Quasispecies DiversityMercedes Guerrero-Murillo | Mercedes Guerrero-Murillo | software | 28 Apr 2026 | 816 | 26 |
| qsmooth Smooth quantile normalizationStephanie C. Hicks | Stephanie C. Hicks | software | 28 Apr 2026 | 793 | 118 |
| QUBIC An R Package for Qualitative Biclustering in Support of Gene Co-Expression AnalysesYu Zhang | Yu Zhang | software | 28 Apr 2026 | 737 | 10 |
| qsvaR Generate Quality Surrogate Variable Analysis for Degradation CorrectionNicholas J. Eagles | Nicholas J. Eagles | software | 28 Apr 2026 | 703 | 91 |
| qmtools Quantitative Metabolomics Data Processing ToolsJaehyun Joo | Jaehyun Joo | software | 28 Apr 2026 | 658 | 135 |
| Qtlizer Comprehensive QTL annotation of GWAS resultsMatthias Munz | Matthias Munz | software | 28 Apr 2026 | 628 | 21 |
| QTLExperiment S4 classes for QTL summary statistics and metadataAmelia Dunstone | Amelia Dunstone | software | 28 Apr 2026 | 555 | 64 |
| QuaternaryProd Computes the Quaternary Dot Product Scoring Statistic for Signed and Unsigned Causal GraphsCarl Tony Fakhry | Carl Tony Fakhry | software | 28 Apr 2026 | 552 | 21 |
| QRscore Quantile Rank ScoreFanding Zhou | Fanding Zhou | software | 28 Apr 2026 | 464 | 39 |
| queeems Quantify the Extent of Evolutionary Evidence in Molecular SequencesHassan Sadiq | Hassan Sadiq | software | 28 Apr 2026 | 313 | 19 |