qsmooth
Bioc currentSmooth quantile normalization
Release Lineage
Entered 3.9 · May 3, 2019
Current · Requires R 4.6
Description
Smooth quantile normalization is a generalization of quantile normalization, which is average of the two types of assumptions about the data generation process: quantile normalization and quantile normalization between groups.
Test coverage
Line coverage
–
Expression
–
Tests / Examples
–
Functions
5 4 exported
Complexity
5.4 avg / 14 max
Call network
5 nodes / 3 edges
Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.
Call graph
Open call graph →Lowest coverage
Per-function coverage is not measured for this package yet.
Code
Structure
Lines of code
1,452
Files
25
Compiled share
0%
Has compiled src
No
Language breakdown
API
Exported functions
4
Internal functions
1
Recent export changes
Testing & CI
Has tests
Yes
Test-to-code ratio
0.09
testthat edition
–
CI present
No
CI type
[]
PR gated
No
Docs
Roxygen coverage
100%
Health & Security signals
Informational signals; not verdicts.
on.exit coverage
0%
Unsafe pattern score
0
Dep constraint coverage
0%
Secret pattern count
0
Bundled 3rd-party code
2 items
Portability & License
Min R version
4.0
System requirements
–
C++ standard
–
License
GPL-3
License flags
SPDX valid, OSI approved
History
Versions
15
First release
2019-05-02
Latest release
2026-04-28
Avg cadence
182 days
Cold removal rate
–
Dep drift
1
LOC over versions
Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.
Documentation
- Examples that run
- 100%
- Documented parameters
- 100%
- Return-value docs
- 100%
- References docs
- 14%
Topics
Depended on by (2)
Bioconductor (1)
CRAN (1)
People
- Stephanie C. Hicks author maintainer
- Hector Corrada Bravo author
- Rafael Irizarry author
- Kwame Okrah author
- Koen Van den Berge contributor