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First letter: Q

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Release: Release 3.21 (2025)

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28 packages on Bioconductor, most distinct IPs first

PackageMaintainerCategoryLatest versionDistinct IPs a monthNeeds
qvalue
Q-value estimation for false discovery rate controlJohn D. Storey		John D. Storeysoftware28 Apr 202627,74531
QFeatures
Quantitative features for mass spectrometry dataLaurent Gatto		Laurent Gattosoftware28 Apr 20264,54099
quantiseqr
Quantification of the Tumor Immune contexture from RNA-seq dataFederico Marini		Federico Marinisoftware28 Apr 20261,72758
QuasR
Quantify and Annotate Short Reads in RMichael Stadler		Michael Stadlersoftware28 Apr 20261,551114
qpgraph
Estimation of Genetic and Molecular Regulatory Networks from High-Throughput Genomics DataRobert Castelo		Robert Castelosoftware28 Apr 20261,49581
qusage
qusage: Quantitative Set Analysis for Gene ExpressionChristopher Bolen		Christopher Bolensoftware28 Apr 20261,47619
quantsmooth
Quantile smoothing and genomic visualization of array dataJan Oosting		Jan Oostingsoftware28 Apr 20261,33014
QDNAseq
Quantitative DNA Sequencing for Chromosomal AberrationsDaoud Sie		Daoud Siesoftware28 Apr 20261,28848
quantro
A test for when to use quantile normalizationStephanie Hicks		Stephanie Hickssoftware28 Apr 20261,244153
qcmetrics
A Framework for Quality ControlLaurent Gatto		Laurent Gattosoftware28 Apr 20261,19020
qsea
IP-seq data analysis and vizualizationMatthias Lienhard		Matthias Lienhardsoftware28 Apr 202695064
qpcrNorm
Data-driven normalization strategies for high-throughput qPCR data.Jessica Mar		Jessica Marsoftware28 Apr 202691214
qPLEXanalyzer
Tools for quantitative proteomics data analysisAshley Sawle		Ashley Sawlesoftware28 Apr 2026893148
QSutils
Quasispecies DiversityMercedes Guerrero-Murillo		Mercedes Guerrero-Murillosoftware28 Apr 202681626
qsmooth
Smooth quantile normalizationStephanie C. Hicks		Stephanie C. Hickssoftware28 Apr 2026793118
QUBIC
An R Package for Qualitative Biclustering in Support of Gene Co-Expression AnalysesYu Zhang		Yu Zhangsoftware28 Apr 202673710
qsvaR
Generate Quality Surrogate Variable Analysis for Degradation CorrectionNicholas J. Eagles		Nicholas J. Eaglessoftware28 Apr 202670391
qmtools
Quantitative Metabolomics Data Processing ToolsJaehyun Joo		Jaehyun Joosoftware28 Apr 2026658135
Qtlizer
Comprehensive QTL annotation of GWAS resultsMatthias Munz		Matthias Munzsoftware28 Apr 202662821
QTLExperiment
S4 classes for QTL summary statistics and metadataAmelia Dunstone		Amelia Dunstonesoftware28 Apr 202655564
QuaternaryProd
Computes the Quaternary Dot Product Scoring Statistic for Signed and Unsigned Causal GraphsCarl Tony Fakhry		Carl Tony Fakhrysoftware28 Apr 202655221
QRscore
Quantile Rank ScoreFanding Zhou		Fanding Zhousoftware28 Apr 202646439
QDNAseq.hg19
QDNAseq bin annotation for hg19Daoud Sie		Daoud Sieexperiment5 May 202639449
QuartPAC
Identification of mutational clusters in protein quaternary structures		no date on record390
QUBICdata
Data employed in the vignette of the QUBIC packageYu Zhang		Yu Zhangexperiment5 May 20263040
QDNAseq.mm10
Bin annotation mm10Daoud Sie		Daoud Sieexperiment5 May 202627149
qckitfastq
FASTQ Quality Control		no date on record267
qPLEXdata
Data accompanying qPLEXanalyzer packageKamal Kishore Developer		Kamal Kishore Developerexperiment18 Jun 2026168149