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Topic: GraphAndNetwork or Infrastructure or SingleCell

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22 packages on Bioconductor tagged GraphAndNetwork or Infrastructure or SingleCell, most distinct IPs first

GraphAndNetwork, Infrastructure and SingleCell in Topics

PackageMaintainerCategoryLatest versionDistinct IPs a monthNeeds
Nebulosa
Single-Cell Data Visualisation Using Kernel Gene-Weighted Density EstimationJose Alquicira-Hernandez		Jose Alquicira-Hernandezsoftware28 Apr 20262,00083
nucleR
Nucleosome positioning package for RAlba Sala		Alba Salasoftware28 Apr 20261,14576
NanoStringNCTools
NanoString nCounter ToolsMaddy Griswold		Maddy Griswoldsoftware28 Apr 20261,13677
normr
Normalization and difference calling in ChIP-seq dataJohannes Helmuth		Johannes Helmuthsoftware21 May 20261,06483
netresponse
Functional Network AnalysisLeo Lahti		Leo Lahtisoftware28 Apr 202693869
netSmooth
Network smoothing for scRNAseqJonathan Ronen		Jonathan Ronensoftware28 Apr 2026897170
nethet
A bioconductor package for high-dimensional exploration of biological network heterogeneityNicolas Staedler		Nicolas Staedlersoftware28 Apr 202684574
NanoMethViz
Visualise methylation data from Oxford Nanopore sequencingShian Su		Shian Susoftware28 Apr 2026818146
nnSVG
Scalable identification of spatially variable genes in spatially-resolved transcriptomics dataLukas M. Weber		Lukas M. Webersoftware16 Jul 202681679
NetPathMiner
NetPathMiner for Biological Network Construction, Path Mining and VisualizationAhmed Mohamed		Ahmed Mohamedsoftware28 Apr 202675517
ncRNAtools
An R toolkit for non-coding RNALara Selles Vidal		Lara Selles Vidalsoftware23 Jul 202668539
nipalsMCIA
Multiple Co-Inertia Analysis via the NIPALS MethodMaximilian Mattessich		Maximilian Mattessichsoftware28 Apr 202668087
NewWave
Negative binomial model for scRNA-seqFederico Agostinis		Federico Agostinissoftware10 Aug 202664744
ndexr
NDEx R client libraryFlorian Auer		Florian Auersoftware28 Apr 202662240
nempi
Inferring unobserved perturbations from gene expression dataMartin Pirkl		Martin Pirklsoftware28 Apr 2026607109
netboost
Network Analysis Supported by BoostingPascal Schlosser		Pascal Schlossersoftware28 Apr 202656182
NCIgraph
Pathways from the NCI Pathways DatabaseLaurent Jacob		Laurent Jacobsoftware28 Apr 202653657
nearBynding
Discern RNA structure proximal to protein bindingVeronica Busa		Veronica Busasoftware4 Nov 2025514105
notame
Workflow for non-targeted LC-MS metabolic profilingVilhelm Suksi		Vilhelm Suksisoftware28 Apr 202646165
notameViz
Workflow for non-targeted LC-MS metabolic profilingVilhelm Suksi		Vilhelm Suksisoftware28 Apr 202641982
notameStats
Workflow for non-targeted LC-MS metabolic profilingVilhelm Suksi		Vilhelm Suksisoftware28 Apr 202637768
netZooR
A menagerie of methods for the inference and analysis of gene regulatory networksMarouen Ben Guebila		Marouen Ben Guebilasoftwareno date on record318