notame
Bioc currentWorkflow for non-targeted LC-MS metabolic profiling
Release Lineage
Entered 3.22 · Oct 30, 2025
Current · Requires R 4.6
Description
Provides functionality for untargeted LC-MS metabolomics research as specified in the associated protocol article in the 'Metabolomics Data Processing and Data Analysis—Current Best Practices' special issue of the Metabolites journal (2020). This includes tabular data preprocessing and quality control, uni- and multivariate analysis as well as quality control visualizations, feature-wise visualizations and results visualizations. Raw data preprocessing and functionality related to biological context, such as pathway analysis, is not included.
Code
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Topics
Depended on by (2)
Bioconductor (2)
People
- Vilhelm Suksi author maintainer
- Retu Haikonen author
- Kati Hanhineva author
- Anton Klåvus author cph
- Ville Koistinen contributor
- Olli Kärkkäinen contributor
- Leo Lahti author
- Atte Lihtamo author
- Jussi Paananen author cph
- Artur Sannikov contributor
- Oskari Timonen author cph