ncRNAtools
Bioc currentAn R toolkit for non-coding RNA
Release Lineage
Entered 3.12 · Oct 28, 2020
Current · Requires R 4.6
Description
ncRNAtools provides a set of basic tools for handling and analyzing non-coding RNAs. These include tools to access the RNAcentral database and to predict and visualize the secondary structure of non-coding RNAs. The package also provides tools to read, write and interconvert the file formats most commonly used for representing such secondary structures.
Test coverage
Line coverage
–
Expression
–
Tests / Examples
–
Functions
32 0 exported
Complexity
2.9 avg / 7 max
Call network
32 nodes / 35 edges
Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.
Call graph
Open call graph →Lowest coverage
Per-function coverage is not measured for this package yet.
Code
Structure
Lines of code
2,132
Files
36
Compiled share
0%
Has compiled src
No
Language breakdown
API
Exported functions
15
Internal functions
32
Testing & CI
Has tests
Yes
Test-to-code ratio
0.00
testthat edition
–
CI present
No
CI type
[]
PR gated
No
Docs
Roxygen coverage
0%
Health & Security signals
Informational signals; not verdicts.
on.exit coverage
0%
Unsafe pattern score
0
Dep constraint coverage
0%
Secret pattern count
0
Bundled 3rd-party code
2 items
Portability & License
Min R version
–
System requirements
–
C++ standard
–
License
GPL-3
License flags
SPDX valid, OSI approved
History
Versions
12
First release
2020-10-27
Latest release
2026-04-30
Avg cadence
182 days
Cold removal rate
–
Dep drift
0
LOC over versions
Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.
Documentation
- Examples that run
- 100%
- Documented parameters
- not tracked
- Return-value docs
- not tracked
- References docs
- 67%
Topics
People
- Lara Selles Vidal maintainer author
- Rafael Ayala author
- Rodrigo Ledesma-Amaro author
- Guy-Bart Stan author