R Observatory: Metrics for tinyarray version 3.0.0

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

tinyarray

3.0.0

Expression Data Analysis and Visualization

0packages depend

12.4Kdownloads / year

–test coverage

13/13checks pass

Overview

About

Maintained by Xiaojie SunFirst published 2021-09-1411 releasesCRAN page ↗

A toolkit for microarray and RNA-seq data analysis, including annotation conversion, differential expression, enrichment, survival analysis, and visualization.

Install

R (CRAN)Ubuntu (r2u)

install.packages("tinyarray", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-tinyarray

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

Health

CRAN checks

13OK

Slowest check: 5.0 min · r-oldrel-windows-x86_64

Code health

None

Tests · ratio 0.00

not tracked

Coverage

100%

Documentation · exports

12

Dependencies · direct

Check history

OK2026-08-04
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-08-01
12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-06-27
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-06-21
12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-06-09
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Show 6 earlier snapshots

ERROR2026-06-08
12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-05-10
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-05-03
12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-04-25
12 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-03-12
13 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-03-10
12 OK · 1 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE

Documentation

READMEYes · 3,684 wordsVignettesNopkgdown siteNoNEWSNoCode of conductNoContributing guideNo

Examples that run: 78%
Documented parameters: 97%
Return-value docs: 100%
References docs: 0%

Downloads

12.4K

CRAN downloads in the past year

Rank #3,303 · ~34/day · ~1K/mo

Releases R versions

Daily download trend is not available in this view yet.

1.5K30 days

3.3K90 days

12.4K1 year

Compare downloads with other packages →

Also on159 r2u1.3K bioconda25 c2d4u

Dependencies

Declared dependencies

35 external dependencies (excludes base and recommended)

Depends (1)

R >= 4.3.0

Imports (12)

Hmisc dplyr ggplot2 limma patchwork pheatmap stringr curl httr2survivalsurvminer tibble

LinkingTo (0)

none

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

Datasets

People & History

People (1)

Maintainer (1)

Xiaojie Sun

Author, Maintainer

Authors (1)

Xiaojie Sun

Author, Maintainer

Package Timeline

11 releases. Pick two to compare their code metrics. R releases are shown for context.

3.0.0Latest
2026-08-02 · current release · diff ↗
R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
2.4.3
2025-03-05 · diff ↗
2.4.2
2024-06-13 · diff ↗
2.4.1
2024-06-04 · diff ↗
unarchivedReturned to CRAN
2024-06-03
archivedRemoved from CRAN
2024-05-04
issues were not corrected in time
R
R 4.4.0 released · 2024-04-24
2.3.3
2024-04-09 · diff ↗
2.3.2
2024-01-22 · diff ↗
2.3.1
2023-08-18 · diff ↗
2.3.0
2023-04-24 · diff ↗
unarchivedReturned to CRAN
2023-04-24
R
R 4.3.0 released · 2023-04-21
archivedRemoved from CRAN
2023-04-17
policy violation On Internet access. (In '\donttest' examples.)

Show 5 earlier events

2.2.9
2023-03-04 · diff ↗
R
R 4.2.0 released · 2022-04-22
2.2.7
2021-11-08 · diff ↗
2.2.6
2021-09-14
R
R 4.1.0 released · 2021-05-18

Package metadata

First published: 2021-09-14
Total releases: 11 / 5 yrs
License: MIT + file LICENSE OSI
Minimum R: ≥ 4.3.0
Bundled data: 1.4 MB / 11 files
Download size: 1.5 MB
Installed size: not tracked yet
With dependencies: not tracked yet

Appears in task views

Genomics, Proteomics, Metabolomics, Transcriptomics, and Other Omics

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("tinyarray")

Format

Sun, X. (2026). tinyarray: Expression Data Analysis and Visualization (Version 3.0.0) [Computer software]. https://doi.org/10.32614/CRAN.package.tinyarray

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for tinyarray version 3.0.0 [Data set]. HJJB, LLC. Data release v2026-08-23. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-23, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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