R Observatory: Metrics for tidysdm version 1.0.4

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

tidysdm

1.0.4

Species Distribution Models with Tidymodels

0packages depend

8Kdownloads / year

75.0%test coverage

13/13checks pass

Overview

About

Maintained by Andrea ManicaFirst published 2023-11-138 releasesCRAN page ↗GitHub ↗

Fit species distribution models (SDMs) using the 'tidymodels' framework, which provides a standardised interface to define models and process their outputs. 'tidysdm' expands 'tidymodels' by providing methods for spatial objects, models and metrics specific to SDMs, as well as a number of specialised functions to process occurrences for contemporary and palaeo datasets. The full functionalities of the package are described in Leonardi et al. (2024) doi:10.1111/2041-210X.14406.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("tidysdm", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("EvolEcolGroup/tidysdm")

Development version from EvolEcolGroup/tidysdm. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-tidysdm

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-tidysdm

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-tidysdm

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 15.9 min · r-oldrel-windows-x86_64

Code health

Yes

Tests · ratio 0.44

75.0%

Coverage · measured lines

98%

Documentation · exports

24

Dependencies · direct

Check history

OK2026-08-04
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-08-01
12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-06-09
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-06-08
12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-04-25
12 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Show 3 earlier snapshots

NOTE2026-04-24
11 OK · 3 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-04-20
10 OK · 3 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
NOTE2026-03-10
11 OK · 3 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 632 wordsVignettesYes · dynamicpkgdown siteNoNEWSYes · 100% structuredCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 100%
Return-value docs: 100%
References docs: 7%

Downloads

8K

CRAN downloads in the past year

Rank #7,541 · ~22/day · ~669/mo

Releases R versions

Daily download trend is not available in this view yet.

34030 days

1.1K90 days

8K1 year

Compare downloads with other packages →

Also on268 r2u23 autocran1.3K conda_forge

Repository

GitHub ↗ evolecolgroup/tidysdm

37Stars

10Forks

2Open issues

1Open PRs

6Releases

612Commits

16Contributors

rspecies-distribution-modellingtidymodels

License AGPL-3.0 · 612 commits · Last activity 2026-07-22 · 0% stars, 30d

Stars over time

2025-08-15 · 342026-07-07 · 37

Repository practices

Upstream repositoryBeta

6 development-tooling and community-health practices detected across 6 families in the upstream repository

Checks run against github.com/evolecolgroup/tidysdm on 2026-08-16.

Continuous integration (1)

GitHub Actions

Reproducibility and dev environment (1)

data-raw/

CRAN release process (1)

cran-comments.md

Lint, format, editor (1)

lintr

Show all practices

Coverage (1)

.covrignore

Governance and community (1)

Issue templates

How this is detected·Detection ruleset v1 (2026-07-18)

Development tooling

AI-assisted toolingBeta

Uses AI-assisted development tooling (declared in repo)

Earliest detected marker: claude on 2026-07-01

claudecopilot

Most recent: copilot on 2026-07-15

Evidence

claude: on 2026-07-01 · evidence D
copilot: on 2026-07-15 · evidence A, PR · sole bot-author seen

How this is detected·Detection ruleset v2 (updated 2026-07-29)

Dependencies

Declared dependencies

41 external dependencies (excludes base and recommended)

Depends (3)

R >= 3.5.0tidymodels spatialsample

Imports (22)

DALEX dials dplyr ggplot2 lubridate maxnetmethodsparsnip patchwork recipes rsample rlangstatsstars sf terra tibble tune xgboost workflows workflowsets yardstick

LinkingTo (0)

none

Suggests (20)

blockCV data.table DALEXtra doParallel earth kernlab knitrmgcvoverlapping pastclim ranger rgbif rmarkdown spelling stacks testthat tidyterra vdiffr ggpattern RhpcBLASctl

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

Datasets

People & History

People (6)

Maintainer (1)

Andrea Manica

Author, Maintainer

Authors (5)

Andrea Manica

Author, Maintainer

Margherita Colucci

Author

Michela Leonardi

Author

Andrea Vittorio Pozzi

Author · added in 1.0.0

Eleanor M.L. Scerri

Author · added in 1.0.0

Contributors (1)

Ben Tupper

Contributor · added in 1.0.0

Listed in earlier versions (1)

Andrea Pozzi

no longer listed · 0.9.5

Package Timeline

8 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
1.0.4Latest
2025-12-13 · current release · diff ↗
1.0.3
2025-09-05 · diff ↗
1.0.2
2025-08-22 · diff ↗
R
R 4.5.0 released · 2025-04-11
1.0.0
2025-03-05 · diff ↗
0.9.5
2024-06-23 · diff ↗
R
R 4.4.0 released · 2024-04-24
0.9.4
2024-03-05 · diff ↗
0.9.3
2024-01-17 · diff ↗
0.9.2
2023-11-13
R
R 4.3.0 released · 2023-04-21

Package metadata

First published: 2023-11-13
Total releases: 8 / 3 yrs
License: AGPL (>= 3) OSI
Minimum R: ≥ 3.5.0
Bundled data: 1.5 MB / 5 files
Download size: 3.3 MB
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("tidysdm")

Format

Manica, A., Colucci, M., Leonardi, M., Pozzi, A. V., Scerri, E. M. L., & Tupper, B. (2025). tidysdm: Species Distribution Models with Tidymodels (Version 1.0.4) [Computer software]. https://doi.org/10.32614/CRAN.package.tidysdm

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for tidysdm version 1.0.4 [Data set]. HJJB, LLC. Data release v2026-08-22. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-22, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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