R Observatory: Metrics for shapr version 1.0.8

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

shapr

1.0.8

Prediction Explanation with Dependence-Aware Shapley Values

4packages depend

32.7Kdownloads / year

61.2%test coverage

13/13checks pass

Overview

About

Maintained by Martin JullumFirst published 2020-09-0314 releasesCRAN page ↗GitHub ↗

Complex machine learning models are often hard to interpret. However, in many situations it is crucial to understand and explain why a model made a specific prediction. Shapley values is the only method for such prediction explanation framework with a solid theoretical foundation. Previously known methods for estimating the Shapley values do, however, assume feature independence. This package implements methods which accounts for any feature dependence, and thereby produces more accurate estimates of the true Shapley values. An accompanying 'Python' wrapper ('shaprpy') is available through PyPI.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("shapr", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("NorskRegnesentral/shapr")

Development version from NorskRegnesentral/shapr. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-shapr

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-shapr

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-shapr

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 16.0 min · r-devel-windows-x86_64

Code health

Yes

Tests · ratio 0.40

61.2%

Coverage · measured lines

100%

Documentation · exports

8

Dependencies · direct

Check history

OK2026-08-04
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-08-01
12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-06-09
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-06-08
12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-04-25
12 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Show 3 earlier snapshots

NOTE2026-04-22
11 OK · 3 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-04-18
10 OK · 3 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
NOTE2026-03-10
11 OK · 3 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 987 wordsVignettesYes · dynamicpkgdown siteNoNEWSYes · 100% structuredCode of conductNoContributing guideNo

Examples that run: 30%
Documented parameters: 87%
Return-value docs: 100%
References docs: 6%

Downloads

32.7K

CRAN downloads in the past year

Rank #3,051 · ~90/day · ~2.7K/mo

Releases R versions

Daily download trend is not available in this view yet.

1.2K30 days

4.2K90 days

32.7K1 year

Compare downloads with other packages →

Also on483 r2u20 autocran67 c2d4u

Repository

GitHub ↗ norskregnesentral/shapr

178Stars

36Forks

6Open issues

4Open PRs

17Releases

327Commits

11Contributors

rstatsrcpprcpparmadilloshapleyexplainable-aiexplainable-ml

327 commits · Last activity 2026-08-07 · 0% stars, 30d

Stars over time

2025-08-18 · 1642026-08-15 · 178

Repository practices

Upstream repositoryBeta

7 development-tooling and community-health practices detected across 5 families in the upstream repository

Checks run against github.com/norskregnesentral/shapr on 2026-08-16.

Continuous integration (1)

GitHub Actions

CRAN release process (1)

cran-comments.md

Docs source (1)

README.Rmd

Lint, format, editor (3)

lintrVS CodeRStudio project

Show all practices

Coverage (1)

.covrignore

How this is detected·Detection ruleset v1 (2026-07-18)

Development tooling

AI-assisted toolingBeta

Uses AI-assisted development tooling (declared in repo)

Earliest detected marker: copilot on 2026-05-16

copilot

Most recent: copilot on 2026-05-16

Evidence

agents-md: on 2026-05-16 · evidence D
copilot: on 2026-05-16 · evidence D, PR

How this is detected·Detection ruleset v2 (updated 2026-07-29)

Dependencies

Declared dependencies

34 external dependencies (excludes base and recommended)

Depends (1)

R >= 3.5.0

Imports (8)

statsdata.table RcppMatrixfuture.applymethodscli rlang

LinkingTo (2)

RcppArmadillo Rcpp

Suggests (28)

ranger xgboostmgcvtestthat knitr rmarkdown roxygen2 ggplot2 gbm party partykit waldo progressr future ggbeeswarm vdiffr forecast torch GGally coro parsnip recipes workflows tune dials yardstick hardhat rsample

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

4direct

0indirect

MLwrap futurize nestedcv rtemis

Code & Tests

People & History

People (9)

Maintainer (1)

Martin Jullum

Maintainer, Author

Authors (5)

Martin Jullum

Maintainer, Author

Jon Lachmann

Author · added in 1.0.1

Lars Henry Berge Olsen

Author · added in 1.0.1

Annabelle Redelmeier

Author · added in 0.2.0

Nikolai Sellereite

Author

Contributors (3)

Camilla Lingjærde

Contributor

Anders Løland

Contributor

Jens Christian Wahl

Contributor

Copyright holders (1)

Norsk Regnesentral

Copyright holder, Funder

Funders (1)

Norsk Regnesentral

Copyright holder, Funder

Package Timeline

14 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
1.0.8Latest
2026-01-20 · current release · diff ↗
1.0.7
2025-12-22 · diff ↗
unarchivedReturned to CRAN
2025-12-22
archivedRemoved from CRAN
2025-12-17
issues were not corrected in time
1.0.6
2025-11-17 · diff ↗
1.0.5
2025-08-25 · diff ↗
1.0.4
2025-04-28 · diff ↗
R
R 4.5.0 released · 2025-04-11
1.0.3
2025-04-01 · diff ↗
1.0.2
2025-02-07 · diff ↗
unarchivedReturned to CRAN
2025-02-07
archivedRemoved from CRAN
2025-01-30
issues were not corrected in time, and for repeated policy violations including repeatedly spamming a team member in unreadably small HTML
1.0.1
2025-01-16 · diff ↗
R
R 4.4.0 released · 2024-04-24
0.2.2
2023-05-04 · diff ↗

Show 11 earlier events

R
R 4.3.0 released · 2023-04-21
0.2.1
2023-02-27 · diff ↗
R
R 4.2.0 released · 2022-04-22
R
R 4.1.0 released · 2021-05-18
0.2.0
2021-01-28 · diff ↗
0.1.4
2021-01-21 · diff ↗
unarchivedReturned to CRAN
2021-01-21
archivedRemoved from CRAN
2021-01-20
check problems were not corrected in time
0.1.3
2020-09-04 · diff ↗
0.1.2
2020-09-03
R
R 4.0.0 released · 2020-04-24

Package metadata

First published: 2020-09-03
Total releases: 14 / 6 yrs
License: MIT + file LICENSE OSI
Minimum R: ≥ 3.5.0
Download size: 3.3 MB
Installed size: not tracked yet
With dependencies: not tracked yet

Appears in task views

Machine Learning & Statistical Learning

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("shapr")

Format

Jullum, M., Norsk Regnesentral, Lachmann, J., Lingjærde, C., Løland, A., Olsen, L. H. B., Redelmeier, A., Sellereite, N., & Wahl, J. C. (2026). shapr: Prediction Explanation with Dependence-Aware Shapley Values (Version 1.0.8) [Computer software]. https://doi.org/10.32614/CRAN.package.shapr

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for shapr version 1.0.8 [Data set]. HJJB, LLC. Data release v2026-08-18. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-18, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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