phylosignal
Exploring the Phylogenetic Signal in Continuous Traits
Description
A collection of tools to explore the phylogenetic signal in univariate and multivariate data. The package provides functions to plot traits data against a phylogenetic tree, different measures and tests for the phylogenetic signal, methods to describe where the signal is located and a phylogenetic clustering method.
Downloads
551
Last 30 days
6843rd
1.4K
Last 90 days
7.9K
Last year
Trend: +42.4% (30d vs prior 30d)
26
Last 30 days
117
Last 90 days
407
Last year
Trend: -35% (30d vs prior 30d)
4
Last 7 days
25
Last 30 days
1
All-time
autoCRAN-only: this name is served only by autoCRAN, so the count is exact.
103
Last 30 days
341
Last 90 days
2.7K
Last year
Trend: -42.5% (30d vs prior 30d)
38
Last 30 days
152
Last 90 days
523
Last year
Trend: -39.7% (30d vs prior 30d)
CRAN Check Status
Show all 13 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | NOTE |
| r-devel-linux-x86_64-debian-gcc | NOTE |
| r-devel-linux-x86_64-fedora-clang | OK |
| r-devel-linux-x86_64-fedora-gcc | OK |
| r-devel-windows-x86_64 | OK |
| r-oldrel-macos-arm64 | OK |
| r-oldrel-macos-x86_64 | OK |
| r-oldrel-windows-x86_64 | OK |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check details (2 non-OK)
CRAN incoming feasibility
Maintainer: ‘Francois Keck <francois.keck@gmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = "Francois",
family = "Keck",
role = c("aut", "cre"),
email = "francois.keck@gmail.com")
as necessary.
CRAN incoming feasibility
Maintainer: ‘Francois Keck <francois.keck@gmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = "Francois",
family = "Keck",
role = c("aut", "cre"),
email = "francois.keck@gmail.com")
as necessary.
Check History
NOTE 11 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Jun 9, 2026
CRAN incoming feasibility
Maintainer: ‘Francois Keck <francois.keck@gmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = "Francois",
family = "Keck",
role = c("aut", "cre"),
email = "francois.keck@gmail.com")
as necessary.
CRAN incoming feasibility
Maintainer: ‘Francois Keck <francois.keck@gmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = "Francois",
family = "Keck",
role = c("aut", "cre"),
email = "francois.keck@gmail.com")
as necessary.
ERROR 11 OK · 1 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Jun 8, 2026
CRAN incoming feasibility
Maintainer: ‘Francois Keck <francois.keck@gmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = "Francois",
family = "Keck",
role = c("aut", "cre"),
email = "francois.keck@gmail.com")
as necessary.
CRAN incoming feasibility
Maintainer: ‘Francois Keck <francois.keck@gmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = "Francois",
family = "Keck",
role = c("aut", "cre"),
email = "francois.keck@gmail.com")
as necessary.
NOTE 12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Apr 22, 2026
CRAN incoming feasibility
Maintainer: ‘Francois Keck <francois.keck@gmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = "Francois",
family = "Keck",
role = c("aut", "cre"),
email = "francois.keck@gmail.com")
as necessary.
CRAN incoming feasibility
Maintainer: ‘Francois Keck <francois.keck@gmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = "Francois",
family = "Keck",
role = c("aut", "cre"),
email = "francois.keck@gmail.com")
as necessary.
ERROR 11 OK · 2 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Apr 18, 2026
CRAN incoming feasibility
Maintainer: ‘Francois Keck <francois.keck@gmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = "Francois",
family = "Keck",
role = c("aut", "cre"),
email = "francois.keck@gmail.com")
as necessary.
CRAN incoming feasibility
Maintainer: ‘Francois Keck <francois.keck@gmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = "Francois",
family = "Keck",
role = c("aut", "cre"),
email = "francois.keck@gmail.com")
as necessary.
whether package can be installed
Installation failed. See 'd:/Rcompile/CRANpkg/local/4.6/phylosignal.Rcheck/00install.out' for details.
NOTE 12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
CRAN incoming feasibility
Maintainer: ‘Francois Keck <francois.keck@gmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = "Francois",
family = "Keck",
role = c("aut", "cre"),
email = "francois.keck@gmail.com")
as necessary.
CRAN incoming feasibility
Maintainer: ‘Francois Keck <francois.keck@gmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = "Francois",
family = "Keck",
role = c("aut", "cre"),
email = "francois.keck@gmail.com")
as necessary.
Code
Structure
Lines of code
5,243
Files
79
Compiled share
5.7%
Has compiled src
Yes
Language breakdown
API
Exported functions
39
Internal functions
4
Recent export changes
Testing & CI
Has tests
Yes
Test-to-code ratio
0.01
testthat edition
–
CI present
No
CI type
[]
PR gated
No
Docs
Return-value doc rate
73.3%
\dontrun example ratio
33.3%
Roxygen coverage
100%
Has pkgdown
No
NEWS present
No
Health & Security signals
Informational signals; not verdicts.
on.exit coverage
0%
Unsafe pattern score
3
Dep constraint coverage
8.3%
Secret pattern count
0
Bundled 3rd-party code
2 items
Portability & License
Min R version
–
System requirements
–
C++ standard
–
License
GPL-3
License flags
SPDX valid, OSI approved
History
Versions
5
First release
2015-10-26
Latest release
2023-10-12
Avg cadence
593 days
Cold removal rate
–
Dep drift
2
LOC over versions
Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/cran-code-metrics.